Variant report

Variant rs2160156
Chromosome Location chr19:20006269-20006270
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19977600-20006800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:19978800-20007600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:19979200-20007400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:19979400-20008200 ZNF genes & repeats Liver Liver
5 chr19:19989600-20007400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr19:19990800-20007000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
7 chr19:19994800-20007600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
8 chr19:19995000-20006800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
9 chr19:19996800-20006400 ZNF genes & repeats H1 Cell Line embryonic stem cell
10 chr19:19998200-20007000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
11 chr19:19998800-20006400 ZNF genes & repeats Fetal Brain Female brain
12 chr19:20002000-20010600 Weak transcription Pancreas Pancrea
13 chr19:20003200-20006800 Weak transcription Rectal Smooth Muscle rectum
14 chr19:20003200-20009000 Weak transcription Ovary ovary
15 chr19:20003200-20011200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr19:20003600-20011000 Weak transcription Colon Smooth Muscle Colon
17 chr19:20003600-20011000 Weak transcription Stomach Smooth Muscle stomach
18 chr19:20003800-20011000 Weak transcription Fetal Heart heart
19 chr19:20004800-20011200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr19:20005600-20006400 ZNF genes & repeats Fetal Intestine Small intestine
21 chr19:20005600-20006400 ZNF genes & repeats Fetal Stomach stomach
22 chr19:20005600-20006600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr19:20006000-20006800 Strong transcription Fetal Lung lung

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