Variant report

Variant	rs2161387
Chromosome Location	chr5:151377631-151377632
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11743674	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1445675	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1445676	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4958510	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72802265	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72802277	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72802278	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72802280	0.94[EUR][1000 genomes]

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs2161387	ZNF300P1	cis	parietal	SCAN
rs2161387	ZNF300	cis	parietal	SCAN
rs2161387	G3BP1	cis	cerebellum	SCAN
rs2161387	SPARC	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151377000-151377800	ZNF genes & repeats	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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