Variant report

Variant	rs2178663
Chromosome Location	chr12:124433905-124433906
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr12:124433692-124434419	HepG2	liver:	n/a	n/a
2	MAFK	chr12:124433599-124434202	HepG2	liver:	n/a	n/a
3	HEY1	chr12:124433895-124434108	HepG2	liver:	n/a	n/a
4	HNF4G	chr12:124433854-124434410	HepG2	liver:	n/a	chr12:124434136-124434148 chr12:124434135-124434150 chr12:124434171-124434185 chr12:124434136-124434148 chr12:124434171-124434184 chr12:124434171-124434184 chr12:124434133-124434148 chr12:124434136-124434148 chr12:124434135-124434150 chr12:124434171-124434184 chr12:124434135-124434150 chr12:124434136-124434149 chr12:124434171-124434185 chr12:124434135-124434150 chr12:124434136-124434148
5	ARID3A	chr12:124433782-124434567	HepG2	liver:	n/a	n/a
6	HNF4G	chr12:124433708-124434434	HepG2	liver:	n/a	chr12:124434136-124434148 chr12:124434135-124434150 chr12:124434171-124434185 chr12:124434136-124434148 chr12:124434171-124434184 chr12:124434171-124434184 chr12:124434133-124434148 chr12:124434136-124434148 chr12:124433803-124433818 chr12:124434135-124434150 chr12:124434171-124434184 chr12:124434135-124434150 chr12:124434136-124434149 chr12:124434171-124434185 chr12:124434135-124434150 chr12:124434136-124434148
7	MAFK	chr12:124433703-124434242	HepG2	liver:	n/a	n/a
8	RCOR1	chr12:124433832-124434187	HepG2	liver:	n/a	n/a
9	MAFF	chr12:124433538-124434296	HepG2	liver:	n/a	n/a
10	RFX5	chr12:124433858-124434396	HepG2	liver:	n/a	n/a
11	POLR2A	chr12:124433275-124434113	HepG2	liver:	n/a	n/a
12	MYBL2	chr12:124433644-124434341	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:124432308..124434626-chr12:124455003..124457050,2	K562	blood:
2	chr12:124433267..124435422-chr12:124476091..124477918,2	K562	blood:

Variant related genes	Relation type
CCDC92	TF binding region
ENSG00000119242	Chromatin interaction
ENSG00000179195	Chromatin interaction
ENSG00000270095	Chromatin interaction

Extended variants
information (count: 97 )
Associated
traits (count: 5 )

rSNPs within LD-proxies of this variant (count:96)

rs_ID	r²[population]
rs1054852	1.00[CHB][hapmap];0.92[CHD][hapmap];0.84[MEX][hapmap]
rs10773048	0.88[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs10846579	0.92[CEU][hapmap];0.86[EUR][1000 genomes]
rs10846580	0.92[CEU][hapmap];0.83[GIH][hapmap];0.81[TSI][hapmap];0.88[EUR][1000 genomes]
rs11057393	0.86[EUR][1000 genomes]
rs11057394	0.92[CEU][hapmap];0.86[EUR][1000 genomes]
rs11057396	1.00[ASW][hapmap];0.92[CEU][hapmap];0.86[GIH][hapmap];0.83[MEX][hapmap];0.82[MKK][hapmap];0.82[TSI][hapmap];0.88[YRI][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11057397	1.00[ASW][hapmap];0.92[CEU][hapmap];0.86[GIH][hapmap];0.84[MEX][hapmap];0.80[MKK][hapmap];0.83[TSI][hapmap];0.96[YRI][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11057399	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11057400	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11057401	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11057407	1.00[CHB][hapmap];0.89[JPT][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11057408	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.94[MEX][hapmap];0.84[TSI][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11057409	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.94[MEX][hapmap];0.85[TSI][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11057412	0.92[CEU][hapmap];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11057413	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11831913	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11833002	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11835839	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11837287	0.95[CEU][hapmap];0.88[CHB][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1187415	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.89[MEX][hapmap];0.81[TSI][hapmap];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12296259	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12298484	1.00[ASW][hapmap];0.92[CEU][hapmap];0.85[GIH][hapmap];0.84[MEX][hapmap];0.82[MKK][hapmap];0.84[TSI][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12301673	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12303671	0.92[CEU][hapmap];1.00[CHB][hapmap];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12303933	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12310367	0.92[CEU][hapmap];1.00[CHB][hapmap];0.80[YRI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12311114	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.88[YRI][hapmap];0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12311848	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12316080	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12317176	0.92[CEU][hapmap];0.87[EUR][1000 genomes]
rs12809125	0.92[CEU][hapmap];0.86[EUR][1000 genomes]
rs12809473	0.92[CEU][hapmap];1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12823740	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.81[TSI][hapmap];0.88[ASN][1000 genomes]
rs12824567	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[YRI][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12827409	0.96[CEU][hapmap];1.00[CHB][hapmap];0.85[YRI][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12829951	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12833624	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1882491	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2130382	1.00[CEU][hapmap];0.88[YRI][hapmap];0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3186071	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34114498	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34180676	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34854841	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34878139	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35099862	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35825716	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3768	0.83[YRI][hapmap]
rs3789967	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3802999	1.00[ASW][hapmap];0.92[CEU][hapmap];0.86[GIH][hapmap];0.84[MEX][hapmap];0.80[MKK][hapmap];0.85[TSI][hapmap];0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4405410	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4575361	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4765127	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.94[MEX][hapmap];0.85[TSI][hapmap];0.81[YRI][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4765148	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4765219	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.94[MEX][hapmap];0.84[MKK][hapmap];0.85[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4765305	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4765335	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4765528	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4765541	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4765562	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4765568	1.00[CHB][hapmap];0.82[CHD][hapmap]
rs4930721	1.00[ASW][hapmap];0.96[CEU][hapmap];0.96[GIH][hapmap];0.89[MEX][hapmap];0.90[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4930722	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4930723	0.91[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.89[YRI][hapmap];0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4930724	0.83[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4930725	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4930726	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.81[TSI][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55990776	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56041971	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6488912	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6488913	0.92[CEU][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6488914	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7131882	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7132655	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7133378	0.84[CEU][hapmap];0.86[GIH][hapmap]
rs7134121	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7135314	0.92[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs71458830	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7301953	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7305864	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.82[MKK][hapmap];0.85[TSI][hapmap];0.83[YRI][hapmap];0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7307053	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7307277	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.94[MEX][hapmap];0.85[TSI][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7311233	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7311969	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];0.89[MEX][hapmap];0.81[TSI][hapmap];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7312404	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.84[MKK][hapmap];0.85[TSI][hapmap];0.92[YRI][hapmap];0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7955815	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7958691	0.91[CEU][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7961449	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7964945	0.90[JPT][hapmap]
rs7966192	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7973683	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7975482	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.94[MEX][hapmap];0.85[TSI][hapmap];0.81[YRI][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7978610	0.92[CEU][hapmap];1.00[CHB][hapmap];0.83[CHD][hapmap];0.89[GIH][hapmap];0.94[MEX][hapmap];0.85[TSI][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs952632	0.92[CEU][hapmap];1.00[CHB][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9863	0.88[CEU][hapmap];0.96[GIH][hapmap];0.91[TSI][hapmap];0.92[EUR][1000 genomes]
rs9971695	0.92[CEU][hapmap];0.83[GIH][hapmap];0.81[TSI][hapmap];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498024	chr12:123994372-124459856	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs2178663	CCDC92	cis	Heart Left Ventricle	GTEx
rs2178663	COQ5	cis	cerebellum	SCAN
rs2178663	ARL6IP4	cis	cerebellum	SCAN
rs2178663	CCDC92	cis	cerebellum	SCAN
rs2178663	RP11-380L11.4	cis	Esophagus Muscularis	GTEx

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:124417600-124443600	Weak transcription	Fetal Kidney	kidney
2	chr12:124422400-124439200	Weak transcription	Psoas Muscle	Psoas
3	chr12:124423600-124442200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
4	chr12:124426800-124436800	Weak transcription	NHLF	lung
5	chr12:124427000-124455000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr12:124427200-124434000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
7	chr12:124427200-124436800	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr12:124427200-124456200	Weak transcription	Esophagus	oesophagus
9	chr12:124427400-124436200	Enhancers	Fetal Brain Male	brain
10	chr12:124427800-124436800	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr12:124427800-124444800	Weak transcription	Primary hematopoietic stem cells	blood
12	chr12:124427800-124453400	Weak transcription	A549	lung
13	chr12:124428400-124455800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr12:124428400-124456000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr12:124428800-124436400	Weak transcription	Fetal Heart	heart
16	chr12:124428800-124449800	Weak transcription	HSMM	muscle
17	chr12:124428800-124455800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
18	chr12:124430000-124435400	Weak transcription	NHDF-Ad	bronchial
19	chr12:124430000-124454800	Weak transcription	Primary T helper cells PMA-I stimulated	--
20	chr12:124430000-124456200	Weak transcription	Fetal Thymus	thymus
21	chr12:124430200-124435000	Weak transcription	Aorta	Aorta
22	chr12:124430200-124443600	Weak transcription	Colon Smooth Muscle	Colon
23	chr12:124430200-124445600	Weak transcription	Sigmoid Colon	Sigmoid Colon
24	chr12:124430200-124453400	Weak transcription	Duodenum Smooth Muscle	Duodenum
25	chr12:124430200-124455600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
26	chr12:124430400-124435000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr12:124430400-124443600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
28	chr12:124430400-124449800	Weak transcription	Primary B cells from peripheral blood	blood
29	chr12:124430400-124450400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr12:124430400-124454800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr12:124430400-124455800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr12:124430400-124456000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
33	chr12:124430400-124456000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr12:124430400-124456000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr12:124430600-124434800	Weak transcription	Ovary	ovary
36	chr12:124430600-124435000	Weak transcription	Placenta	Placenta
37	chr12:124430600-124435000	Weak transcription	Skeletal Muscle Male	skeletal muscle
38	chr12:124430600-124435000	Weak transcription	Skeletal Muscle Female	skeletal muscle
39	chr12:124430600-124435000	Weak transcription	Osteobl	bone
40	chr12:124430600-124436800	Weak transcription	Rectal Mucosa Donor 29	rectum
41	chr12:124430600-124441800	Weak transcription	Primary B cells from cord blood	blood
42	chr12:124430600-124443000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr12:124430600-124452600	Weak transcription	Primary T helper cells fromperipheralblood	blood
44	chr12:124430600-124456200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
45	chr12:124430800-124434000	Weak transcription	Primary T cells fromperipheralblood	blood
46	chr12:124430800-124434800	Weak transcription	Pancreas	Pancrea
47	chr12:124431000-124443000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr12:124431200-124434000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
49	chr12:124431200-124435400	Weak transcription	Spleen	Spleen
50	chr12:124431200-124436400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links