The 2.0 version of rSNPBase

Variant report

Variant rs34854841
Chromosome Location chr12:124451504-124451505
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:124427000-124455000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr12:124427200-124456200 Weak transcription Esophagus oesophagus
3 chr12:124427800-124453400 Weak transcription A549 lung
4 chr12:124428400-124455800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr12:124428400-124456000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr12:124428800-124455800 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr12:124430000-124454800 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr12:124430000-124456200 Weak transcription Fetal Thymus thymus
9 chr12:124430200-124453400 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr12:124430200-124455600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr12:124430400-124454800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr12:124430400-124455800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr12:124430400-124456000 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr12:124430400-124456000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr12:124430400-124456000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr12:124430600-124452600 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr12:124430600-124456200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr12:124431800-124455800 Weak transcription Stomach Smooth Muscle stomach
19 chr12:124434400-124456200 Weak transcription Primary T cells fromperipheralblood blood
20 chr12:124435400-124456000 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr12:124435600-124456000 Weak transcription Placenta Placenta
22 chr12:124435800-124456200 Weak transcription Pancreas Pancrea
23 chr12:124436200-124453200 Weak transcription Fetal Brain Male brain
24 chr12:124436400-124453200 Weak transcription Brain Substantia Nigra brain
25 chr12:124436400-124454600 Weak transcription Brain Germinal Matrix brain
26 chr12:124436400-124455000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr12:124436400-124455800 Weak transcription Brain Angular Gyrus brain
28 chr12:124436400-124456000 Weak transcription Brain Cingulate Gyrus brain
29 chr12:124436600-124452000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr12:124437000-124456200 Weak transcription Gastric stomach
31 chr12:124437200-124453400 Weak transcription Adipose Nuclei Adipose
32 chr12:124442200-124453200 Weak transcription Primary B cells from cord blood blood
33 chr12:124443800-124453200 Weak transcription Colon Smooth Muscle Colon
34 chr12:124443800-124453400 Weak transcription Rectal Smooth Muscle rectum
35 chr12:124443800-124455600 Weak transcription Fetal Heart heart
36 chr12:124443800-124455800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr12:124443800-124456000 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr12:124443800-124456000 Weak transcription Fetal Kidney kidney
39 chr12:124444000-124454600 Weak transcription HepG2 liver
40 chr12:124445000-124454600 Weak transcription Fetal Brain Female brain
41 chr12:124445000-124456000 Weak transcription Primary hematopoietic stem cells blood
42 chr12:124446400-124456200 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr12:124446800-124455800 Weak transcription Stomach Mucosa stomach
44 chr12:124447400-124453400 Weak transcription Brain Anterior Caudate brain
45 chr12:124447600-124455600 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr12:124448000-124456200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr12:124448000-124456200 Weak transcription Lung lung
48 chr12:124448200-124453000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr12:124448200-124454800 Weak transcription Duodenum Mucosa Duodenum
50 chr12:124448400-124456000 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015