The 2.0 version of rSNPBase

Variant report

Variant rs34102591
Chromosome Location chr12:124480801-124480802
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:124461200-124496800 Weak transcription H1 Cell Line embryonic stem cell
2 chr12:124469000-124483000 Weak transcription Ovary ovary
3 chr12:124469000-124492600 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr12:124470800-124490200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr12:124474400-124490400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr12:124474600-124484800 Weak transcription Fetal Kidney kidney
7 chr12:124474800-124481200 Enhancers HMEC breast
8 chr12:124475400-124481200 Strong transcription Placenta Placenta
9 chr12:124475400-124488600 Weak transcription Psoas Muscle Psoas
10 chr12:124475600-124483600 Weak transcription Colonic Mucosa Colon
11 chr12:124475600-124485800 Strong transcription Primary B cells from cord blood blood
12 chr12:124476000-124481800 Weak transcription Spleen Spleen
13 chr12:124476200-124492400 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr12:124476400-124481800 Weak transcription H9 Cell Line embryonic stem cell
15 chr12:124476800-124482200 Genic enhancers Fetal Intestine Large intestine
16 chr12:124477400-124484400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr12:124477400-124484600 Weak transcription Rectal Smooth Muscle rectum
18 chr12:124477600-124483200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr12:124477800-124481000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr12:124477800-124482400 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr12:124477800-124483000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr12:124477800-124483000 Weak transcription Aorta Aorta
23 chr12:124477800-124485800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr12:124477800-124486600 Weak transcription Placenta Amnion Placenta Amnion
25 chr12:124478000-124481600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr12:124478000-124481600 Weak transcription Liver Liver
27 chr12:124478000-124482600 Weak transcription Lung lung
28 chr12:124478000-124483200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr12:124478000-124485000 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr12:124478000-124485000 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr12:124478000-124490200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr12:124478200-124481800 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr12:124478200-124481800 Weak transcription A549 lung
34 chr12:124478200-124482400 Enhancers Brain Hippocampus Middle brain
35 chr12:124478200-124484600 Enhancers Cortex derived primary cultured neurospheres brain
36 chr12:124478200-124489400 Enhancers Fetal Heart heart
37 chr12:124478400-124481000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr12:124478400-124482200 Weak transcription Primary monocytes fromperipheralblood blood
39 chr12:124478400-124483000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr12:124478400-124485000 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr12:124478400-124485000 Weak transcription Hela-S3 cervix
42 chr12:124478600-124482400 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr12:124478600-124482800 Weak transcription Fetal Brain Female brain
44 chr12:124478600-124483000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
45 chr12:124478600-124488200 Weak transcription Colon Smooth Muscle Colon
46 chr12:124478600-124490200 Strong transcription HepG2 liver
47 chr12:124478800-124481200 Enhancers NHDF-Ad bronchial
48 chr12:124478800-124482000 Weak transcription Primary B cells from peripheral blood blood
49 chr12:124479000-124481000 Enhancers Osteobl bone
50 chr12:124479200-124481000 Enhancers Brain Substantia Nigra brain

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Last update: Aug 31, 2015