Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1001590	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10129192	0.81[ASN][1000 genomes]
rs11158416	0.83[ASN][1000 genomes]
rs11158417	0.83[ASN][1000 genomes]
rs11158421	0.81[ASN][1000 genomes]
rs11844118	0.83[ASN][1000 genomes]
rs11848301	0.83[ASN][1000 genomes]
rs12050347	0.84[ASN][1000 genomes]
rs12586384	0.81[ASN][1000 genomes]
rs1467587	0.83[ASN][1000 genomes]
rs17098730	0.81[ASN][1000 genomes]
rs1957682	0.94[ASN][1000 genomes]
rs1957684	0.81[ASN][1000 genomes]
rs2146571	0.84[ASN][1000 genomes]
rs2146572	0.82[ASN][1000 genomes]
rs28610928	0.81[ASN][1000 genomes]
rs34544775	0.83[ASN][1000 genomes]
rs4420428	0.81[ASN][1000 genomes]
rs4421908	0.83[ASN][1000 genomes]
rs6573423	0.85[ASN][1000 genomes]
rs7156798	0.81[ASN][1000 genomes]
rs8014138	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043299	chr14:23766696-24351724	Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
2	esv3405661	chr14:24189883-24670942	Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	131 gene(s)	inside rSNPs	diseases
3	nsv564045	chr14:24224245-24348343	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv901494	chr14:24243637-24386159	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:24339400-24343400	Weak transcription	Ovary	ovary

Quick Search: