Variant report

Variant rs2227265
Chromosome Location chr21:45552003-45552004
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:45528200-45552800 Weak transcription Right Atrium heart
2 chr21:45528800-45552200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr21:45528800-45552200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr21:45528800-45552400 Weak transcription Fetal Heart heart
5 chr21:45528800-45552400 Strong transcription Fetal Intestine Small intestine
6 chr21:45528800-45552600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr21:45529400-45552200 Strong transcription Cortex derived primary cultured neurospheres brain
8 chr21:45530000-45552200 Strong transcription Primary T helper cells PMA-I stimulated --
9 chr21:45530600-45552600 Weak transcription Fetal Brain Male brain
10 chr21:45532600-45552800 Weak transcription Fetal Kidney kidney
11 chr21:45533200-45552400 Strong transcription Fetal Stomach stomach
12 chr21:45533400-45552200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr21:45533400-45552200 Strong transcription NHLF lung
14 chr21:45535200-45552200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr21:45537000-45552200 Strong transcription Right Ventricle heart
16 chr21:45539200-45553000 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr21:45541000-45552800 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr21:45541200-45552800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr21:45542600-45552200 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr21:45544200-45552200 Strong transcription NHEK skin
21 chr21:45547400-45552200 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr21:45547400-45552200 Strong transcription Fetal Muscle Trunk muscle
23 chr21:45547400-45552200 Weak transcription HSMM muscle
24 chr21:45548000-45552600 Weak transcription Small Intestine intestine
25 chr21:45548200-45552200 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr21:45548400-45552400 Weak transcription Primary hematopoietic stem cells blood
27 chr21:45548400-45552600 Weak transcription NH-A brain
28 chr21:45548600-45552600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr21:45548800-45552200 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr21:45548800-45552200 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr21:45548800-45552400 Weak transcription Psoas Muscle Psoas
32 chr21:45549200-45552200 Weak transcription Primary B cells from peripheral blood blood
33 chr21:45549200-45552400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr21:45549200-45552400 Weak transcription HUVEC blood vessel
35 chr21:45549200-45552600 Weak transcription Colon Smooth Muscle Colon
36 chr21:45549200-45553000 Weak transcription Stomach Mucosa stomach
37 chr21:45549400-45552200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr21:45549400-45552400 Weak transcription A549 lung
39 chr21:45549400-45552400 Weak transcription HMEC breast
40 chr21:45549400-45552600 Weak transcription Fetal Lung lung
41 chr21:45550000-45552200 Weak transcription GM12878-XiMat blood
42 chr21:45550200-45552800 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr21:45550600-45552200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
44 chr21:45550800-45552800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr21:45551000-45552200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr21:45551000-45552400 Weak transcription Primary B cells from cord blood blood
47 chr21:45551000-45552400 Weak transcription Primary T cells from cord blood blood
48 chr21:45551000-45552400 Genic enhancers Fetal Adrenal Gland Adrenal Gland
49 chr21:45551000-45552600 Weak transcription Rectal Smooth Muscle rectum
50 chr21:45551200-45552200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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