Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:169564132..169566509-chr1:169578988..169581892,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs3917725	1.00[AMR][1000 genomes]
rs3917746	1.00[AMR][1000 genomes]
rs3917752	0.88[AFR][1000 genomes]
rs3917758	1.00[AMR][1000 genomes]
rs3917769	0.88[AFR][1000 genomes]
rs3917791	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3917798	1.00[AMR][1000 genomes]
rs3917808	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3917809	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3917815	1.00[ASW][hapmap];1.00[LWK][hapmap];0.88[AFR][1000 genomes]
rs3917822	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3917825	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3917829	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74121678	1.00[AMR][1000 genomes]
rs74121680	1.00[AMR][1000 genomes]
rs9332481	1.00[AMR][1000 genomes]
rs9332484	1.00[AMR][1000 genomes]
rs9332487	1.00[AMR][1000 genomes]
rs9332495	1.00[AMR][1000 genomes]
rs9332512	1.00[AMR][1000 genomes]
rs9332521	1.00[AMR][1000 genomes]
rs9332551	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv10418	chr1:169059628-169621268	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:169558800-169570000	Weak transcription	Primary T cells from cord blood	blood
2	chr1:169559200-169570400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr1:169564000-169570200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
4	chr1:169564400-169569800	Weak transcription	Primary T helper cells PMA-I stimulated	--
5	chr1:169565200-169566600	Enhancers	Adipose Nuclei	Adipose
6	chr1:169565200-169570400	Weak transcription	GM12878-XiMat	blood
7	chr1:169565400-169581400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr1:169565600-169566600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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