The 2.0 version of rSNPBase

Variant report

Variant rs2229385
Chromosome Location chr6:49415448-49415449
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:49395400-49429800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr6:49396000-49420800 Strong transcription Liver Liver
3 chr6:49396000-49427400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr6:49396200-49420400 Strong transcription Adipose Nuclei Adipose
5 chr6:49396400-49429400 Weak transcription Stomach Mucosa stomach
6 chr6:49397000-49419800 Strong transcription Rectal Mucosa Donor 29 rectum
7 chr6:49397000-49425800 Strong transcription Primary monocytes fromperipheralblood blood
8 chr6:49397000-49426600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr6:49397200-49421200 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr6:49397400-49425600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr6:49397400-49426000 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr6:49397800-49419800 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr6:49397800-49420000 Strong transcription Duodenum Smooth Muscle Duodenum
14 chr6:49398200-49429600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr6:49398400-49425600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr6:49398400-49427200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:49398600-49420000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr6:49398800-49418800 Strong transcription Primary T cells fromperipheralblood blood
19 chr6:49399800-49420800 Weak transcription H1 Cell Line embryonic stem cell
20 chr6:49401000-49422600 Weak transcription GM12878-XiMat blood
21 chr6:49403000-49428800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr6:49403400-49429600 Weak transcription NHEK skin
23 chr6:49404200-49429600 Weak transcription Right Ventricle heart
24 chr6:49405000-49423200 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr6:49406800-49430400 Weak transcription Esophagus oesophagus
26 chr6:49407400-49417200 Strong transcription Primary B cells from cord blood blood
27 chr6:49407600-49428800 Weak transcription Muscle Satellite Cultured Cells --
28 chr6:49407800-49430400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr6:49407800-49430400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr6:49407800-49430400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr6:49407800-49430400 Weak transcription Lung lung
32 chr6:49408000-49428200 Weak transcription Fetal Brain Male brain
33 chr6:49408000-49429200 Weak transcription Thymus Thymus
34 chr6:49408000-49430400 Weak transcription Gastric stomach
35 chr6:49408200-49428000 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr6:49408200-49429400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr6:49408200-49429600 Weak transcription Hela-S3 cervix
38 chr6:49408400-49422400 Weak transcription Spleen Spleen
39 chr6:49408600-49415800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr6:49408600-49418600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr6:49408600-49422000 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr6:49408600-49429600 Weak transcription K562 blood
43 chr6:49408800-49416000 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr6:49408800-49417200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr6:49408800-49429200 Weak transcription Small Intestine intestine
46 chr6:49408800-49429400 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr6:49408800-49429600 Weak transcription HSMMtube muscle
48 chr6:49408800-49430000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr6:49409000-49415600 Weak transcription HMEC breast
50 chr6:49409000-49421800 Weak transcription Skeletal Muscle Male skeletal muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015