Variant report

Variant rs2229940
Chromosome Location chr4:46995366-46995367
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:46993200-46995400 Active TSS Brain Inferior Temporal Lobe brain
2 chr4:46993400-46997400 Active TSS Brain Angular Gyrus brain
3 chr4:46993400-46997600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
4 chr4:46994000-46997400 Active TSS Brain Anterior Caudate brain
5 chr4:46994200-46996400 Bivalent/Poised TSS Brain Cingulate Gyrus brain
6 chr4:46994400-46995600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
7 chr4:46994400-46995600 Enhancers Pancreas Pancrea
8 chr4:46994400-46996600 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr4:46994400-46996600 Bivalent/Poised TSS Fetal Brain Female brain
10 chr4:46994600-46995400 Bivalent Enhancer Primary T regulatory cells fromperipheralblood blood
11 chr4:46994600-46995400 Bivalent/Poised TSS Brain Germinal Matrix brain
12 chr4:46994600-46995600 Bivalent Enhancer Fetal Muscle Trunk muscle
13 chr4:46994600-46995800 Bivalent/Poised TSS Right Ventricle heart
14 chr4:46994600-46996600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
15 chr4:46994800-46995800 Bivalent Enhancer Placenta Placenta
16 chr4:46994800-46996000 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
17 chr4:46994800-46996600 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
18 chr4:46994800-46996600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
19 chr4:46994800-46996600 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
20 chr4:46994800-46996600 Active TSS Fetal Heart heart
21 chr4:46994800-46997000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
22 chr4:46995000-46995400 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
23 chr4:46995000-46995600 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
24 chr4:46995000-46995600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
25 chr4:46995000-46995600 Bivalent Enhancer Fetal Muscle Leg muscle
26 chr4:46995000-46995800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
27 chr4:46995000-46995800 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
28 chr4:46995000-46996000 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
29 chr4:46995000-46996000 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
30 chr4:46995000-46996200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr4:46995000-46996200 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
32 chr4:46995000-46996400 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr4:46995000-46996400 Bivalent/Poised TSS Colonic Mucosa Colon
34 chr4:46995000-46996400 Flanking Bivalent TSS/Enh NH-A brain
35 chr4:46995000-46996600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
36 chr4:46995000-46996600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
37 chr4:46995000-46996600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr4:46995000-46996600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr4:46995000-46996800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
40 chr4:46995000-46996800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
41 chr4:46995200-46995400 Flanking Bivalent TSS/Enh H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr4:46995200-46995400 Bivalent/Poised TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr4:46995200-46995400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells blood
44 chr4:46995200-46995400 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
45 chr4:46995200-46995400 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr4:46995200-46995400 Flanking Active TSS Brain Substantia Nigra brain
47 chr4:46995200-46995400 Bivalent/Poised TSS Fetal Brain Male brain
48 chr4:46995200-46995400 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
49 chr4:46995200-46995400 Flanking Bivalent TSS/Enh Fetal Stomach stomach
50 chr4:46995200-46995400 Bivalent Enhancer Rectal Mucosa Donor 29 rectum

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