Variant report
| Variant | rs2230235 |
|---|---|
| Chromosome Location | chr18:29116284-29116285 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:29094000-29118800 | Weak transcription | Gastric | stomach |
| 2 | chr18:29094000-29121200 | Weak transcription | Right Ventricle | heart |
| 3 | chr18:29096800-29121800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr18:29096800-29134600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 5 | chr18:29097000-29118800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 6 | chr18:29097200-29118400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 7 | chr18:29097200-29129400 | Weak transcription | Small Intestine | intestine |
| 8 | chr18:29097600-29128000 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 9 | chr18:29097800-29130600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 10 | chr18:29098200-29127600 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 11 | chr18:29098600-29127400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 12 | chr18:29099400-29127400 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 13 | chr18:29099400-29128000 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 14 | chr18:29099600-29127400 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 15 | chr18:29099600-29128000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 16 | chr18:29101400-29131800 | Weak transcription | Stomach Mucosa | stomach |
| 17 | chr18:29102400-29118400 | Weak transcription | Thymus | Thymus |
| 18 | chr18:29103400-29128200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 19 | chr18:29104200-29118400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 20 | chr18:29105200-29127600 | Weak transcription | Fetal Heart | heart |
| 21 | chr18:29105400-29119200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 22 | chr18:29105400-29119200 | Weak transcription | Pancreas | Pancrea |
| 23 | chr18:29105400-29120200 | Weak transcription | Colonic Mucosa | Colon |
| 24 | chr18:29106800-29116600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 25 | chr18:29107200-29120800 | Weak transcription | NH-A | brain |
| 26 | chr18:29108400-29116800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 27 | chr18:29108400-29119600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 28 | chr18:29110600-29121800 | Strong transcription | Hela-S3 | cervix |
| 29 | chr18:29110800-29123200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 30 | chr18:29111000-29127200 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 31 | chr18:29111000-29127400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 32 | chr18:29112400-29116400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 33 | chr18:29113000-29123800 | Strong transcription | Fetal Intestine Small | intestine |
| 34 | chr18:29113400-29118600 | Weak transcription | Fetal Muscle Leg | muscle |
| 35 | chr18:29113600-29126000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 36 | chr18:29114200-29117200 | Strong transcription | NHEK | skin |
| 37 | chr18:29114400-29123600 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 38 | chr18:29114600-29127400 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 39 | chr18:29114800-29116800 | Strong transcription | HMEC | breast |
| 40 | chr18:29114800-29117000 | Strong transcription | K562 | blood |
| 41 | chr18:29114800-29124000 | Strong transcription | Fetal Intestine Large | intestine |
| 42 | chr18:29115200-29127200 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 43 | chr18:29115600-29117400 | Strong transcription | GM12878-XiMat | blood |
| 44 | chr18:29115600-29123400 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 45 | chr18:29115800-29117200 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 46 | chr18:29115800-29119200 | Weak transcription | Fetal Stomach | stomach |
| 47 | chr18:29116000-29116400 | Strong transcription | Ovary | ovary |
| 48 | chr18:29116000-29117000 | Strong transcription | Fetal Lung | lung |
| 49 | chr18:29116000-29117000 | Strong transcription | Placenta | Placenta |
| 50 | chr18:29116000-29117000 | Strong transcription | Fetal Thymus | thymus |
