Variant report

Variant	nsv543674
Chromosome Location	chr18:28856066-29190505
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3533)
CpG islands
(count:2078)
Chromatin interactive
region (count:126)
LncRNA
region (count:23)
Mature miRNA
region (count: 0)
miRNA target
sites (count:7)

(count:3533 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr18:29077614-29077727	K562	blood:	n/a	n/a
2	ARID3A	chr18:29092091-29092828	HepG2	liver:	n/a	n/a
3	ARID3A	chr18:29187408-29187649	HepG2	liver:	n/a	n/a
4	ARID3A	chr18:29186073-29186697	HepG2	liver:	n/a	n/a
5	ARID3A	chr18:29077601-29077799	HepG2	liver:	n/a	n/a
6	ARID3A	chr18:28979641-28979993	HepG2	liver:	n/a	n/a
7	ARID3A	chr18:29016896-29016955	HepG2	liver:	n/a	n/a
8	ARID3A	chr18:28951811-28951837	K562	blood:	n/a	n/a
9	ARID3A	chr18:29113255-29113630	HepG2	liver:	n/a	n/a
10	ARID3A	chr18:29175473-29175517	HepG2	liver:	n/a	n/a
11	ARID3A	chr18:29004374-29004617	K562	blood:	n/a	n/a
12	ARID3A	chr18:29166577-29167110	HepG2	liver:	n/a	chr18:29166636-29166652
13	ARID3A	chr18:28953633-28953959	HepG2	liver:	n/a	n/a
14	ARID3A	chr18:29079137-29079444	HepG2	liver:	n/a	chr18:29079218-29079234
15	ARID3A	chr18:29135862-29136374	HepG2	liver:	n/a	n/a
16	ARID3A	chr18:28976731-28977863	HepG2	liver:	n/a	n/a
17	ARID3A	chr18:29167488-29167920	HepG2	liver:	n/a	n/a
18	ARID3A	chr18:29176005-29176447	HepG2	liver:	n/a	n/a
19	ARID3A	chr18:29003292-29003573	HepG2	liver:	n/a	n/a
20	ARID3A	chr18:29089591-29090755	HepG2	liver:	n/a	n/a
21	ARID3A	chr18:29147012-29147181	HepG2	liver:	n/a	n/a
22	ARID3A	chr18:28980698-28982615	HepG2	liver:	n/a	chr18:28980825-28980841
23	ARID3A	chr18:29171157-29172132	HepG2	liver:	n/a	n/a
24	ARID3A	chr18:28858551-28859115	HepG2	liver:	n/a	n/a
25	ARID3A	chr18:29135876-29136268	K562	blood:	n/a	n/a
26	ARID3A	chr18:29080008-29080113	K562	blood:	n/a	n/a
27	ATF1	chr18:29092424-29092788	K562	blood:	n/a	n/a
28	ATF1	chr18:29043383-29043412	K562	blood:	n/a	n/a
29	ATF2	chr18:28987581-28988048	GM12878	blood:	n/a	n/a
30	ATF2	chr18:29018291-29018807	GM12878	blood:	n/a	n/a
31	ATF2	chr18:29080076-29080707	GM12878	blood:	n/a	n/a
32	ATF2	chr18:29073036-29073485	GM12878	blood:	n/a	n/a
33	ATF2	chr18:29070287-29070762	GM12878	blood:	n/a	n/a
34	ATF2	chr18:29018383-29018706	GM12878	blood:	n/a	n/a
35	ATF2	chr18:29073140-29073511	GM12878	blood:	n/a	n/a
36	ATF2	chr18:29079992-29080785	GM12878	blood:	n/a	n/a
37	ATF2	chr18:29070180-29070762	GM12878	blood:	n/a	n/a
38	ATF3	chr18:29092268-29092710	K562	blood:	n/a	chr18:29092605-29092620
39	BACH1	chr18:28898517-28898684	H1-hESC	embryonic stem cell:	n/a	n/a
40	BACH1	chr18:29134021-29134028	H1-hESC	embryonic stem cell:	n/a	n/a
41	BACH1	chr18:28982605-28982714	K562	blood:	n/a	n/a
42	BACH1	chr18:29077568-29078114	H1-hESC	embryonic stem cell:	n/a	n/a
43	BATF	chr18:28907003-28907162	GM12878	blood:	n/a	n/a
44	BATF	chr18:29018420-29018737	GM12878	blood:	n/a	n/a
45	BATF	chr18:29070334-29070694	GM12878	blood:	n/a	chr18:29070370-29070379
46	BATF	chr18:28935984-28936266	GM12878	blood:	n/a	n/a
47	BATF	chr18:29073201-29073632	GM12878	blood:	n/a	n/a
48	BATF	chr18:28989277-28989486	GM12878	blood:	n/a	n/a
49	BATF	chr18:29018346-29018766	GM12878	blood:	n/a	n/a
50	BATF	chr18:28987665-28987980	GM12878	blood:	n/a	chr18:28987834-28987845

(count:2078 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr18:29171878-29171928	GM12878	blood:	n/a
2	chr18:29170928-29170978	HL-60	blood:	n/a
3	chr18:29077863-29077913	HIPEpiC	eye:	n/a
4	chr18:29026301-29026351	ProgFib	skin:	n/a
5	chr18:29171878-29171928	GM12878	blood:	n/a
6	chr18:29170928-29170978	HL-60	blood:	n/a
7	chr18:29077863-29077913	HIPEpiC	eye:	n/a
8	chr18:29026301-29026351	ProgFib	skin:	n/a
9	chr18:29170604-29170654	SK-N-SH_RA	brain:	n/a
10	chr18:29076604-29076654	PrEC	prostate:	n/a
11	chr18:28957111-28957161	HIPEpiC	eye:	n/a
12	chr18:29080265-29080315	PFSK-1	brain:	n/a
13	chr18:29170928-29170978	GM12878	blood:	n/a
14	chr18:29171878-29171928	NH-A	brain:	n/a
15	chr18:29171545-29171595	H1-hESC	embryonic stem cell:	embryo
16	chr18:29080595-29080645	LNCaP	prostate:	n/a
17	chr18:28956234-28956284	IMR90	lung:	fetal
18	chr18:29027745-29027795	ECC-1	luminal epithelium:	n/a
19	chr18:29077863-29077913	GM12878	blood:	n/a
20	chr18:29170604-29170654	K562	blood:	n/a
21	chr18:28896580-28896630	HCF	heart:	n/a
22	chr18:29077698-29077748	SK-N-SH_RA	brain:	n/a
23	chr18:29027658-29027708	AG09309	skin:	n/a
24	chr18:29127091-29127141	SAEC	small airway:	n/a
25	chr18:28897972-28898022	HAEpiC	amniotic membrane:	n/a
26	chr18:29027701-29027751	NHDF-neo	bronchial:	n/a
27	chr18:29078565-29078615	NT2-D1	testis:	n/a
28	chr18:28898344-28898394	HRCEpiC	kidney:	n/a
29	chr18:28897972-28898022	HUVEC	blood vessel:	n/a
30	chr18:29027885-29027935	HL-60	blood:	n/a
31	chr18:29080265-29080315	HRCEpiC	kidney:	n/a
32	chr18:29170604-29170654	ECC-1	luminal epithelium:	n/a
33	chr18:28898344-28898394	HCPEpiC	choroid plexus:	n/a
34	chr18:29026301-29026351	SK-N-MC	brain:	n/a
35	chr18:29026301-29026351	MCF-7	breast:	n/a
36	chr18:29080265-29080315	MCF10A-Er-Src	breast:	n/a
37	chr18:28898907-28898957	Jurkat	blood:	n/a
38	chr18:29026301-29026351	HUVEC	blood vessel:	n/a
39	chr18:28897972-28898022	RPTEC	kidney:	n/a
40	chr18:29027701-29027751	HNPCEpiC	eye:	n/a
41	chr18:29171878-29171928	LNCaP	prostate:	n/a
42	chr18:29027701-29027751	HCF	heart:	n/a
43	chr18:29171878-29171928	Jurkat	blood:	n/a
44	chr18:29178454-29178504	MCF10A-Er-Src	breast:	n/a
45	chr18:29078241-29078291	HRPEpiC	eye:	n/a
46	chr18:29171977-29172027	HPAEpiC	pulmonary alveolar:	n/a
47	chr18:29027701-29027751	HPAEpiC	pulmonary alveolar:	n/a
48	chr18:29027701-29027751	SK-N-SH_RA	brain:	n/a
49	chr18:29080265-29080315	A549	lung:	n/a
50	chr18:29078478-29078528	CMK	blood:	n/a

(count:126 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr18:29044429..29046768-chr18:29048309..29050870,3	K562	blood:
2	chr18:29082210..29085319-chr18:29089707..29093199,4	K562	blood:
3	chr15:63455063..63457408-chr18:28898675..28901434,2	MCF-7	breast:
4	chr18:28886142..28888955-chr18:28891760..28893393,2	MCF-7	breast:
5	chr18:29003994..29005325-chr18:29086073..29087125,6	MCF-7	breast:
6	chr18:29084753..29086828-chr18:29089364..29091948,2	K562	blood:
7	chr18:28855249..28856898-chr18:28857462..28860362,2	MCF-7	breast:
8	chr18:29007636..29009624-chr18:29016577..29018951,2	MCF-7	breast:
9	chr18:29056016..29057570-chr18:29059465..29061281,2	K562	blood:
10	chr18:28946336..28948969-chr18:28950688..28952608,2	K562	blood:
11	chr18:29098189..29101114-chr18:29103613..29106437,2	MCF-7	breast:
12	chr18:28955738..28957988-chr18:28962797..28964940,2	K562	blood:
13	chr18:29068752..29071565-chr18:29076556..29079913,5	MCF-7	breast:
14	chr18:29066393..29069517-chr18:29071339..29073369,4	K562	blood:
15	chr18:29098189..29101114-chr18:29103613..29106437,2	MCF-7	breast:
16	chr18:28680816..28682711-chr18:29076315..29078384,2	K562	blood:
17	chr18:29075380..29078244-chr18:29078711..29080640,2	MCF-7	breast:
18	chr18:29080297..29083464-chr18:29083547..29086345,4	K562	blood:
19	chr18:29077683..29079249-chr18:29092433..29094661,2	MCF-7	breast:
20	chr18:29003994..29005325-chr18:29086073..29087125,6	MCF-7	breast:
21	chr18:29066393..29069517-chr18:29071339..29073369,4	K562	blood:
22	chr18:28971505..28973722-chr18:28976105..28978957,2	K562	blood:
23	chr18:29003931..29004668-chr18:29134416..29135171,2	MCF-7	breast:
24	chr11:75075892..75077549-chr18:28889516..28891593,2	MCF-7	breast:
25	chr18:29044429..29046768-chr18:29048309..29050870,3	K562	blood:
26	chr18:29065343..29067294-chr18:29076148..29078028,2	MCF-7	breast:
27	chr18:28949707..28951807-chr18:28954134..28956566,2	MCF-7	breast:
28	chr18:28902016..28904959-chr18:28905023..28907896,2	K562	blood:
29	chr18:29003549..29006106-chr18:29084281..29086820,2	MCF-7	breast:
30	chr18:29129102..29131935-chr18:29134564..29137415,2	K562	blood:
31	chr18:29078512..29082072-chr18:29089360..29094851,6	K562	blood:
32	chr18:29058662..29063697-chr18:29063884..29065891,5	K562	blood:
33	chr18:29058662..29063697-chr18:29063884..29065891,5	K562	blood:
34	chr18:29003997..29005002-chr18:29143774..29144455,3	MCF-7	breast:
35	chr18:28932546..28935472-chr18:29078101..29080400,2	K562	blood:
36	chr11:71823410..71824011-chr18:29077781..29078468,2	Hela-S3	cervix:
37	chr18:29135623..29136433-chr18:29206170..29207050,3	MCF-7	breast:
38	chr18:29004062..29004974-chr18:29135505..29136292,3	MCF-7	breast:
39	chr18:29006199..29009130-chr18:29080194..29081726,2	MCF-7	breast:
40	chr18:28949758..28952384-chr18:28959857..28961586,2	MCF-7	breast:
41	chr18:29076759..29079471-chr18:29120956..29123046,2	K562	blood:
42	chr18:29063380..29066106-chr18:29071423..29073407,2	K562	blood:
43	chr18:29003997..29005002-chr18:29143774..29144455,3	MCF-7	breast:
44	chr18:28946336..28948969-chr18:28950688..28952608,2	K562	blood:
45	chr18:29077877..29084482-chr18:29088955..29095937,13	K562	blood:
46	chr18:29056016..29057570-chr18:29059465..29061281,2	K562	blood:
47	chr18:29077396..29079505-chr18:29084410..29087671,4	MCF-7	breast:
48	chr18:29003931..29004668-chr18:29134416..29135171,2	MCF-7	breast:
49	chr18:28680050..28682025-chr18:28855320..28857563,2	MCF-7	breast:
50	chr18:29065798..29067835-chr18:29072600..29075052,2	K562	blood:

(count:23 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-B4GALT6-1	chr18:29122222-29122284	NONHSAT058824
2	lnc-B4GALT6-2	chr18:29076934-29077158	ENSG00000266521.1
3	lnc-DSC1-1	chr18:28923347-28923661	ENSG00000266729.1
4	lnc-DSC1-1	chr18:28944112-28944248	ENSG00000266729.1
5	lnc-B4GALT6-1	chr18:29123065-29123360	NONHSAT058824
6	lnc-B4GALT6-2	chr18:29076934-29076959	XLOC_012803
7	lnc-B4GALT6-1	chr18:29136520-29136868	ENSG00000264859.1
8	lnc-B4GALT6-1	chr18:29130095-29130322	ENSG00000264859.1
9	lnc-B4GALT6-2	chr18:29065357-29065747	XLOC_012803
10	lnc-DSC1-1	chr18:28933863-28933899	ENSG00000266729.1
11	lnc-DSC1-1	chr18:28927631-28927783	ENSG00000266729.1
12	lnc-DSC1-1	chr18:29006796-29006890	ENSG00000266729.1
13	lnc-DSG1-7	chr18:28866469-28866554	NONHSAT058813
14	lnc-DSG1-7	chr18:28867478-28867603	NONHSAT058813
15	lnc-B4GALT6-1	chr18:29135926-29136084	ENSG00000264859.1
16	lnc-DSC1-1	chr18:28923331-28923661	ENSG00000266729.1
17	lnc-DSC1-1	chr18:28934275-28934416	ENSG00000266729.1
18	lnc-B4GALT6-1	chr18:29134605-29134678	ENSG00000264859.1
19	lnc-DSC1-1	chr18:29006796-29006951	ENSG00000266729.1
20	lnc-DSC1-1	chr18:28934275-28934416	ENSG00000266729.1
21	lnc-DSC1-1	chr18:28927683-28927783	ENSG00000266729.1
22	lnc-B4GALT6-2	chr18:29076608-29076815	ENSG00000266521.1
23	lnc-DSC1-1	chr18:28927683-28927783	ENSG00000266729.1

No data

(count:7 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	DSG2	hsa-miR-124-3p	chr18:29126926-29126945
2	DSG2	hsa-miR-124-3p	chr18:29126938-29126944
3	DSG2	hsa-miR-155-5p	chr18:29127332-29127354
4	DSG2	hsa-miR-30a-5p	chr18:29127961-29127982
5	DSG2	hsa-miR-15b-5p	chr18:29126914-29126935
6	DSG2	hsa-miR-30a-5p	chr18:29128479-29128503
7	DSG2	hsa-miR-155-5p	chr18:29127653-29127675

Variant related genes	Relation type
DSG2	TF binding region
DSG1	TF binding region
TTR	TF binding region
ENSG00000264859	TF binding region
DSG3	TF binding region
ENSG00000207240	TF binding region
ENSG00000266521	TF binding region
ENSG00000266729	TF binding region
RNU6-167P	TF binding region
DSG4	TF binding region
DSG2	CpG island
DSG1	CpG island
TTR	CpG island
ENSG00000264859	CpG island
DSG3	CpG island
ENSG00000207240	CpG island
ENSG00000266521	CpG island
ENSG00000266729	CpG island
RNU6-167P	CpG island
DSG4	CpG island
ENSG00000134760	chromatin interactions
ENSG00000266729	chromatin interactions
ENSG00000134755	chromatin interactions
ENSG00000046604	chromatin interactions
ENSG00000265888	chromatin interactions
ENSG00000110200	chromatin interactions
ENSG00000266521	chromatin interactions
ENSG00000175065	chromatin interactions
ENSG00000264859	chromatin interactions
FPGS	miRNA target sites
FRAS1	miRNA target sites

Extended variants
information (count: 12600 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:12600 , 50 per page) page: 1 2 3 4 5 6 7 ... 252

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs572594200	chr18:28856102-28856103	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs537414791	chr18:28856138-28856139	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs539907539	chr18:28856198-28856199	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs558192656	chr18:28856217-28856218	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs149706609	chr18:28856218-28856219	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs544140837	chr18:28856232-28856233	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs564539152	chr18:28856254-28856255	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs562233018	chr18:28856264-28856265	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs574208739	chr18:28856274-28856275	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs568196695	chr18:28856330-28856331	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs541201758	chr18:28856340-28856341	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs561724990	chr18:28856486-28856487	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs532875257	chr18:28856540-28856541	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs551016842	chr18:28856541-28856542	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs563343370	chr18:28856605-28856606	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs377446179	chr18:28856642-28856643	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs373910413	chr18:28856711-28856712	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs530416363	chr18:28856744-28856745	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs549294650	chr18:28856796-28856797	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs34843072	chr18:28856848-28856849	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs186690727	chr18:28856849-28856850	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs535523791	chr18:28856877-28856878	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs115895817	chr18:28856930-28856931	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs546831796	chr18:28856939-28856940	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs571426003	chr18:28856966-28856967	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs117834226	chr18:28856996-28856997	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs554058154	chr18:28857026-28857027	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs558278622	chr18:28857092-28857093	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs527284313	chr18:28857166-28857167	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs145560806	chr18:28857170-28857171	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs141489929	chr18:28857177-28857178	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs547138894	chr18:28857198-28857199	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs57902116	chr18:28857213-28857214	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs35658708	chr18:28857240-28857241	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs574270748	chr18:28857247-28857248	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs191250037	chr18:28857269-28857270	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs184163865	chr18:28857288-28857289	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs577815627	chr18:28857342-28857343	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs200825342	chr18:28857349-28857350	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs139243502	chr18:28857353-28857354	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs370078813	chr18:28857365-28857366	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs189767183	chr18:28857414-28857415	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs563222333	chr18:28857431-28857432	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs181867480	chr18:28857435-28857436	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs374543563	chr18:28857480-28857481	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs9959710	chr18:28857581-28857582	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs147886078	chr18:28857590-28857591	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs528403818	chr18:28857616-28857617	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs28361376	chr18:28857637-28857638	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs571512622	chr18:28857673-28857674	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Esophageal squamous carcinoma	18350619	CNVD
Follicular lymphoma	20505157	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	18923191	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Trisomy 18 syndrome	17576883	CNVD
lymphocytic leukemia	21291569	CNVD
Barrett''s syndrome	19417022	CNVD
Ewing''s sarcoma	17952124	CNVD
Multiple myeloma	17550852	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Glioblastoma multiforme	21922591	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
18q deletion syndrome	19533772	CNVD
Acute myeloid leukemia	16864856	CNVD
Colorectal cancer	21102417	CNVD
Colorectal cancer	20709793	CNVD
Pancreatic cancer	21811562	CNVD
Basal cell lymphoma	21115979	CNVD
Mucosa-associated lymphoid tissue lymphomas	21459788	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
colon cancer	17210682	CNVD
Breast cancer	21785460	CNVD
Hepatocellular carcinoma	16750200	CNVD
Prostate cancer	16573809	CNVD
Autism	16446308	CNVD
Colorectal cancer	19359472	CNVD
Colorectal cancer	16272173	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	18056178	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Metanephric adenoma	20802469	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17133270	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Colorectal cancer	16774939	CNVD
Colorectal cancer	21297112	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	21645411	CNVD
Glioblastoma multiforme	17002787	CNVD
Cancer	21183584	CNVD
Breast cancer	17603634	CNVD
Thyroid cancer	19087340	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Colorectal cancer	16912164	CNVD
Renal cell carcinoma	19150565	CNVD
Multiple myeloma	16616336	CNVD
Colorectal cancer	19150955	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21364760	CNVD
Pancreatic cancer	21811587	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Prostate cancer	22341455	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Cancer	20164919	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:2462 , 50 per page) page: 1 2 3 4 5 6 7 ... 50

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:28853800-28859400	Enhancers	HepG2	liver
2	chr18:28854200-28856400	Enhancers	Adipose Nuclei	Adipose
3	chr18:28854200-28856400	Enhancers	Rectal Mucosa Donor 31	rectum
4	chr18:28854200-28856400	Enhancers	HMEC	breast
5	chr18:28854200-28856600	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr18:28854200-28856600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr18:28854400-28857200	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr18:28854800-28856600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr18:28854800-28857200	Enhancers	Hela-S3	cervix
10	chr18:28855000-28856200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr18:28855000-28856400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr18:28855000-28856400	Enhancers	Fetal Heart	heart
13	chr18:28855000-28856400	Enhancers	Rectal Mucosa Donor 29	rectum
14	chr18:28855000-28856600	Enhancers	Stomach Mucosa	stomach
15	chr18:28855200-28856200	Flanking Active TSS	A549	lung
16	chr18:28855200-28858400	Weak transcription	Duodenum Mucosa	Duodenum
17	chr18:28855200-28858400	Weak transcription	Fetal Intestine Large	intestine
18	chr18:28855400-28860800	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr18:28855600-28856400	Enhancers	NHEK	skin
20	chr18:28855600-28858400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr18:28855800-28858200	Weak transcription	Fetal Intestine Small	intestine
22	chr18:28856000-28856200	Enhancers	HUES6 Cell Line	embryonic stem cell
23	chr18:28856000-28857000	Weak transcription	Gastric	stomach
24	chr18:28856000-28860400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr18:28856000-28861200	Weak transcription	Left Ventricle	heart
26	chr18:28856200-28856400	Enhancers	A549	lung
27	chr18:28856200-28858400	Weak transcription	HUES6 Cell Line	embryonic stem cell
28	chr18:28856400-28857200	Weak transcription	Rectal Mucosa Donor 29	rectum
29	chr18:28856400-28858200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr18:28856400-28858400	Weak transcription	Rectal Mucosa Donor 31	rectum
31	chr18:28856600-28857000	Weak transcription	Stomach Mucosa	stomach
32	chr18:28856600-28858600	Weak transcription	HUES64 Cell Line	embryonic stem cell
33	chr18:28857000-28857400	Enhancers	Esophagus	oesophagus
34	chr18:28857000-28857400	Enhancers	Gastric	stomach
35	chr18:28857000-28859600	Enhancers	Stomach Mucosa	stomach
36	chr18:28857200-28857400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr18:28857200-28857400	Enhancers	Rectal Mucosa Donor 29	rectum
38	chr18:28857200-28857600	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
39	chr18:28857200-28858600	Weak transcription	Hela-S3	cervix
40	chr18:28857400-28858400	Weak transcription	Esophagus	oesophagus
41	chr18:28857400-28858600	Weak transcription	Rectal Mucosa Donor 29	rectum
42	chr18:28857600-28858600	Weak transcription	H9 Cell Line	embryonic stem cell
43	chr18:28858200-28858800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
44	chr18:28858200-28858800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr18:28858200-28859800	Enhancers	Fetal Intestine Small	intestine
46	chr18:28858400-28858800	Enhancers	iPS-15b Cell Line	embryonic stem cell
47	chr18:28858400-28858800	Enhancers	iPS-18 Cell Line	embryonic stem cell
48	chr18:28858400-28858800	Enhancers	Duodenum Mucosa	Duodenum
49	chr18:28858400-28858800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
50	chr18:28858400-28858800	Enhancers	Rectal Mucosa Donor 31	rectum

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