The 2.0 version of rSNPBase

Variant report

Variant rs2230616
Chromosome Location chr2:187532417-187532418
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:187456200-187533000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:187456800-187534400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr2:187457200-187533800 Weak transcription Spleen Spleen
4 chr2:187464800-187536200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr2:187466800-187533200 Weak transcription Colonic Mucosa Colon
6 chr2:187476800-187536200 Weak transcription Fetal Brain Male brain
7 chr2:187482200-187533800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr2:187482800-187533200 Weak transcription Brain Inferior Temporal Lobe brain
9 chr2:187482800-187533600 Weak transcription Rectal Smooth Muscle rectum
10 chr2:187482800-187533800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:187482800-187533800 Weak transcription Psoas Muscle Psoas
12 chr2:187489400-187534400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr2:187494200-187535800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr2:187495000-187534400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr2:187501000-187548400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr2:187502800-187533000 Weak transcription H9 Cell Line embryonic stem cell
17 chr2:187503400-187545000 Weak transcription Hela-S3 cervix
18 chr2:187505400-187533400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr2:187506600-187533400 Weak transcription NHLF lung
20 chr2:187506600-187537000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr2:187507800-187546600 Weak transcription Small Intestine intestine
22 chr2:187510800-187535000 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr2:187511200-187536200 Strong transcription HUES64 Cell Line embryonic stem cell
24 chr2:187511400-187546600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr2:187511600-187545000 Strong transcription Osteobl bone
26 chr2:187513800-187546800 Strong transcription NH-A brain
27 chr2:187514600-187546200 Strong transcription Placenta Placenta
28 chr2:187515200-187536200 Weak transcription Primary B cells from cord blood blood
29 chr2:187515600-187533200 Weak transcription Gastric stomach
30 chr2:187516400-187543600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:187516600-187535000 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr2:187516600-187545400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr2:187518800-187547200 Strong transcription HUVEC blood vessel
34 chr2:187520000-187545000 Weak transcription ES-WA7 Cell Line embryonic stem cell
35 chr2:187520200-187537000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr2:187521800-187533800 Weak transcription Aorta Aorta
37 chr2:187522000-187533000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr2:187522000-187533000 Weak transcription Fetal Intestine Small intestine
39 chr2:187522000-187533200 Weak transcription Fetal Stomach stomach
40 chr2:187522000-187533800 Weak transcription Esophagus oesophagus
41 chr2:187523000-187546800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr2:187523200-187535800 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr2:187523400-187537200 Strong transcription Fetal Intestine Large intestine
44 chr2:187525000-187543200 Weak transcription Thymus Thymus
45 chr2:187525400-187535000 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr2:187525400-187541800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr2:187526600-187537200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr2:187527600-187537000 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr2:187527600-187537400 Strong transcription HepG2 liver
50 chr2:187527600-187543600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015