Variant report

Variant	rs223596
Chromosome Location	chr6:143702848-143702849
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143701463..143703254-chr6:143713766..143715572,2	MCF-7	breast:

rs_ID	r²[population]
rs10457048	0.89[EUR][1000 genomes]
rs10457746	0.83[EUR][1000 genomes]
rs10457747	0.87[EUR][1000 genomes]
rs11155292	0.91[EUR][1000 genomes]
rs12189815	0.91[EUR][1000 genomes]
rs12195895	0.89[EUR][1000 genomes]
rs12197703	0.89[EUR][1000 genomes]
rs12199599	0.91[EUR][1000 genomes]
rs12200633	0.89[EUR][1000 genomes]
rs12205775	0.89[EUR][1000 genomes]
rs12209005	0.83[EUR][1000 genomes]
rs12209255	0.81[EUR][1000 genomes]
rs12212973	0.91[EUR][1000 genomes]
rs12525791	0.91[EUR][1000 genomes]
rs12525816	0.91[EUR][1000 genomes]
rs1345992	0.89[EUR][1000 genomes]
rs1424923	0.89[EUR][1000 genomes]
rs1424931	0.89[EUR][1000 genomes]
rs1424934	0.91[EUR][1000 genomes]
rs1424936	0.91[EUR][1000 genomes]
rs170350	0.91[EUR][1000 genomes]
rs1834268	0.91[EUR][1000 genomes]
rs1885650	0.81[EUR][1000 genomes]
rs223593	0.91[EUR][1000 genomes]
rs223594	0.91[EUR][1000 genomes]
rs223595	0.91[EUR][1000 genomes]
rs223597	0.91[EUR][1000 genomes]
rs223598	0.91[EUR][1000 genomes]
rs223600	0.91[EUR][1000 genomes]
rs223601	0.91[EUR][1000 genomes]
rs223602	0.91[EUR][1000 genomes]
rs223603	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs223608	0.91[EUR][1000 genomes]
rs223609	0.88[EUR][1000 genomes]
rs223610	0.91[EUR][1000 genomes]
rs2303387	0.81[EUR][1000 genomes]
rs2328477	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62430899	0.89[EUR][1000 genomes]
rs62430900	0.91[EUR][1000 genomes]
rs62430901	0.91[EUR][1000 genomes]
rs62430902	0.91[EUR][1000 genomes]
rs6908200	0.89[EUR][1000 genomes]
rs6914161	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6937320	0.89[EUR][1000 genomes]

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143673000-143708000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:143702000-143703600	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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