The 2.0 version of rSNPBase

Variant report

Variant rs2236572
Chromosome Location chr1:147127737-147127738
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:147097600-147130000 Weak transcription Stomach Mucosa stomach
2 chr1:147111000-147128400 Weak transcription HUVEC blood vessel
3 chr1:147113000-147136200 Weak transcription NH-A brain
4 chr1:147113000-147141400 Weak transcription Fetal Brain Male brain
5 chr1:147113200-147130800 Weak transcription NHEK skin
6 chr1:147114000-147141000 Weak transcription Osteobl bone
7 chr1:147114200-147133800 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr1:147117200-147131800 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr1:147117800-147130400 Weak transcription NHLF lung
10 chr1:147118000-147133800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr1:147118200-147136600 Weak transcription HSMM muscle
12 chr1:147118600-147130400 Weak transcription GM12878-XiMat blood
13 chr1:147118800-147136600 Weak transcription Placenta Amnion Placenta Amnion
14 chr1:147119000-147128200 Strong transcription Fetal Intestine Small intestine
15 chr1:147119000-147131800 Weak transcription Fetal Heart heart
16 chr1:147119000-147132000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:147119000-147132200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:147119600-147131600 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr1:147120000-147141400 Weak transcription Fetal Thymus thymus
20 chr1:147121200-147128600 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr1:147121200-147130600 Weak transcription Brain Cingulate Gyrus brain
22 chr1:147121400-147128200 Strong transcription Primary T cells from cord blood blood
23 chr1:147121400-147130600 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr1:147122000-147141400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:147122400-147132800 Weak transcription Brain Germinal Matrix brain
26 chr1:147122400-147141600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:147124000-147130400 Weak transcription Primary B cells from cord blood blood
28 chr1:147124200-147127800 Enhancers Placenta Placenta
29 chr1:147124200-147130200 Weak transcription HSMMtube muscle
30 chr1:147124200-147140200 Weak transcription Fetal Kidney kidney
31 chr1:147124200-147140200 Weak transcription HMEC breast
32 chr1:147124200-147141200 Weak transcription Psoas Muscle Psoas
33 chr1:147124400-147129200 Weak transcription Duodenum Mucosa Duodenum
34 chr1:147124400-147130000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:147124400-147130200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:147124400-147130400 Weak transcription Fetal Brain Female brain
37 chr1:147124400-147132000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:147124400-147132600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:147124400-147133800 Weak transcription Fetal Lung lung
40 chr1:147124400-147136600 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr1:147124400-147140200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr1:147124400-147141000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:147124400-147141200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:147124400-147141400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr1:147124600-147130400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:147124600-147130600 Weak transcription Muscle Satellite Cultured Cells --
47 chr1:147124600-147141000 Weak transcription A549 lung
48 chr1:147125400-147128000 Strong transcription Brain Hippocampus Middle brain
49 chr1:147125600-147127800 Strong transcription HUES48 Cell Line embryonic stem cell
50 chr1:147125600-147128600 Strong transcription Primary hematopoietic stem cells blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015