Variant report

Variant rs2239470
Chromosome Location chrX:153598413-153598414
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chrX:153576400-153599400 ZNF genes & repeats Fetal Stomach stomach
2 chrX:153576600-153598800 ZNF genes & repeats H9 Cell Line embryonic stem cell
3 chrX:153576600-153599800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
4 chrX:153576800-153603600 ZNF genes & repeats Fetal Brain Female brain
5 chrX:153592200-153599400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
6 chrX:153594200-153598800 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
7 chrX:153595000-153600600 Active TSS HSMMtube muscle
8 chrX:153595600-153599000 Transcr. at gene 5' and 3' A549 lung
9 chrX:153595600-153599600 Transcr. at gene 5' and 3' NHLF lung
10 chrX:153596400-153599600 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
11 chrX:153596400-153600800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chrX:153596600-153598600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chrX:153596600-153599000 Transcr. at gene 5' and 3' Dnd41 blood
14 chrX:153596600-153600000 Active TSS Thymus Thymus
15 chrX:153596800-153598600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
16 chrX:153596800-153599000 Active TSS Right Atrium heart
17 chrX:153596800-153600400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
18 chrX:153596800-153600400 Active TSS GM12878-XiMat blood
19 chrX:153596800-153600600 Active TSS Primary T helper naive cells from peripheral blood blood
20 chrX:153596800-153601000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chrX:153596800-153601200 Active TSS HSMM muscle
22 chrX:153596800-153601600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chrX:153596800-153601600 Active TSS Rectal Smooth Muscle rectum
24 chrX:153596800-153602200 Active TSS Duodenum Smooth Muscle Duodenum
25 chrX:153597000-153598600 Flanking Active TSS Fetal Thymus thymus
26 chrX:153597000-153598800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chrX:153597000-153600200 Active TSS Primary T cells from cord blood blood
28 chrX:153597000-153600400 Active TSS Primary monocytes fromperipheralblood blood
29 chrX:153597000-153600400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
30 chrX:153597000-153600400 Active TSS Brain Anterior Caudate brain
31 chrX:153597000-153600400 Active TSS Esophagus oesophagus
32 chrX:153597000-153600400 Active TSS HMEC breast
33 chrX:153597000-153600600 Active TSS ES-WA7 Cell Line embryonic stem cell
34 chrX:153597000-153600600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chrX:153597000-153600600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
36 chrX:153597000-153600600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
37 chrX:153597000-153600600 Active TSS Primary T helper naive cells fromperipheralblood blood
38 chrX:153597000-153600600 Active TSS Primary T killer naive cells fromperipheralblood blood
39 chrX:153597000-153600600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chrX:153597000-153600600 Active TSS NH-A brain
41 chrX:153597000-153600600 Active TSS NHDF-Ad bronchial
42 chrX:153597000-153600800 Active TSS ES-I3 Cell Line embryonic stem cell
43 chrX:153597000-153600800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
44 chrX:153597000-153601000 Active TSS Primary T killer memory cells from peripheral blood blood
45 chrX:153597000-153601000 Active TSS Left Ventricle heart
46 chrX:153597000-153604000 Bivalent/Poised TSS Breast Myoepithelial Primary Cells Breast
47 chrX:153597200-153600000 Active TSS Fetal Kidney kidney
48 chrX:153597200-153600200 Active TSS Fetal Lung lung
49 chrX:153597200-153600200 Active TSS Small Intestine intestine
50 chrX:153597200-153600400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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