Variant report
Variant | rs2242640 |
---|---|
Chromosome Location | chr14:80285757-80285758 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1013449 | 0.88[AFR][1000 genomes] |
rs1013450 | 0.88[AFR][1000 genomes] |
rs10144662 | 0.91[AFR][1000 genomes] |
rs11159418 | 0.88[AFR][1000 genomes] |
rs1159038 | 0.88[AFR][1000 genomes] |
rs12431745 | 0.85[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs12885142 | 0.88[AFR][1000 genomes] |
rs17174997 | 0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs1997565 | 0.88[AFR][1000 genomes] |
rs1997566 | 0.88[AFR][1000 genomes] |
rs1997567 | 0.88[AFR][1000 genomes] |
rs2178886 | 0.88[AFR][1000 genomes] |
rs2223034 | 0.88[AFR][1000 genomes] |
rs2242641 | 0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs2293831 | 0.88[AFR][1000 genomes] |
rs2371104 | 0.88[AFR][1000 genomes] |
rs4243665 | 0.86[AFR][1000 genomes] |
rs4903881 | 0.88[AFR][1000 genomes] |
rs4903882 | 0.88[AFR][1000 genomes] |
rs4903883 | 0.88[AFR][1000 genomes] |
rs6574525 | 0.88[AFR][1000 genomes] |
rs6574526 | 0.88[AFR][1000 genomes] |
rs6574527 | 0.88[AFR][1000 genomes] |
rs7156557 | 0.88[AFR][1000 genomes] |
rs7157885 | 0.88[AFR][1000 genomes] |
rs727105 | 0.88[AFR][1000 genomes] |
rs727106 | 0.88[AFR][1000 genomes] |
rs8003909 | 0.88[AFR][1000 genomes] |
rs8009908 | 0.88[AFR][1000 genomes] |
rs8010821 | 0.88[AFR][1000 genomes] |
rs8016178 | 0.88[AFR][1000 genomes] |
rs8016336 | 0.88[AFR][1000 genomes] |
rs8017057 | 0.91[AFR][1000 genomes] |
rs8020458 | 0.88[AFR][1000 genomes] |
rs932261 | 0.91[AFR][1000 genomes] |
rs932262 | 0.88[AFR][1000 genomes] |
rs932263 | 0.91[AFR][1000 genomes] |
rs932264 | 0.91[AFR][1000 genomes] |
rs932265 | 0.88[AFR][1000 genomes] |
rs959165 | 0.88[AFR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1045241 | chr14:79885361-80734201 | Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 9 gene(s) | inside rSNPs | diseases |
2 | nsv902113 | chr14:80172094-80929699 | Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 7 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:80281000-80286600 | Weak transcription | Brain Inferior Temporal Lobe | brain |