Variant report

Variant rs2242655
Chromosome Location chr6:31627449-31627450
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31621400-31627600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr6:31621400-31627600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:31626000-31627800 Enhancers Fetal Brain Male brain
4 chr6:31626000-31628200 Flanking Active TSS K562 blood
5 chr6:31626200-31628000 Flanking Active TSS Hela-S3 cervix
6 chr6:31626200-31628200 Flanking Active TSS Duodenum Mucosa Duodenum
7 chr6:31626200-31628400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
8 chr6:31626200-31628400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
9 chr6:31626400-31628400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr6:31626600-31627800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
11 chr6:31626600-31628000 Flanking Active TSS Brain Germinal Matrix brain
12 chr6:31626600-31628000 Flanking Active TSS Rectal Smooth Muscle rectum
13 chr6:31626600-31628200 Flanking Active TSS Fetal Brain Female brain
14 chr6:31626600-31628200 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
15 chr6:31626600-31628200 Flanking Active TSS Stomach Smooth Muscle stomach
16 chr6:31626600-31628400 Transcr. at gene 5' and 3' Dnd41 blood
17 chr6:31626800-31627600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr6:31626800-31627600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr6:31626800-31627600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
20 chr6:31626800-31627600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
21 chr6:31626800-31627600 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
22 chr6:31626800-31627600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:31626800-31627600 Flanking Active TSS Pancreas Pancrea
24 chr6:31626800-31627600 Flanking Active TSS Psoas Muscle Psoas
25 chr6:31626800-31627600 Flanking Active TSS HSMM muscle
26 chr6:31626800-31627600 Flanking Active TSS Osteobl bone
27 chr6:31626800-31627800 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
28 chr6:31626800-31627800 Flanking Active TSS Colon Smooth Muscle Colon
29 chr6:31626800-31627800 Transcr. at gene 5' and 3' Fetal Stomach stomach
30 chr6:31626800-31628000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
31 chr6:31626800-31628000 Flanking Active TSS Brain Anterior Caudate brain
32 chr6:31626800-31628000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
33 chr6:31626800-31628000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
34 chr6:31626800-31628200 Flanking Active TSS Liver Liver
35 chr6:31626800-31628200 Flanking Active TSS Brain Cingulate Gyrus brain
36 chr6:31626800-31628200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
37 chr6:31626800-31628200 Flanking Active TSS NH-A brain
38 chr6:31626800-31629000 Flanking Active TSS Adipose Nuclei Adipose
39 chr6:31626800-31629000 Active TSS Pancreatic Islets Pancreatic Islet
40 chr6:31626800-31629200 Active TSS iPS-15b Cell Line embryonic stem cell
41 chr6:31626800-31629200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
42 chr6:31626800-31629200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
43 chr6:31627000-31627600 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
44 chr6:31627000-31627600 Transcr. at gene 5' and 3' Placenta Placenta
45 chr6:31627000-31627600 Flanking Active TSS NHEK skin
46 chr6:31627000-31627800 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr6:31627000-31627800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
48 chr6:31627000-31627800 Flanking Active TSS Colonic Mucosa Colon
49 chr6:31627000-31627800 Flanking Active TSS Right Atrium heart
50 chr6:31627000-31627800 Flanking Active TSS Sigmoid Colon Sigmoid Colon

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