The 2.0 version of rSNPBase

Variant report

Variant rs2243655
Chromosome Location chr10:28344794-28344795
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:28330000-28345000 Weak transcription Pancreas Pancrea
2 chr10:28331200-28345000 Weak transcription Aorta Aorta
3 chr10:28335000-28345800 Weak transcription Brain Angular Gyrus brain
4 chr10:28335600-28345000 Weak transcription Fetal Stomach stomach
5 chr10:28336200-28349400 Weak transcription Gastric stomach
6 chr10:28336400-28346000 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr10:28336600-28345600 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr10:28336800-28346600 Weak transcription Primary hematopoietic stem cells blood
9 chr10:28337400-28347400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr10:28337800-28345000 Weak transcription Fetal Intestine Small intestine
11 chr10:28337800-28346000 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr10:28338200-28345000 Weak transcription Left Ventricle heart
13 chr10:28338400-28345000 Weak transcription Esophagus oesophagus
14 chr10:28339000-28345000 Weak transcription Lung lung
15 chr10:28339800-28345000 Weak transcription Primary T cells from cord blood blood
16 chr10:28341200-28350000 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr10:28341200-28377600 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr10:28341400-28346400 Weak transcription Spleen Spleen
19 chr10:28341800-28348600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
20 chr10:28341800-28349000 Strong transcription Primary neutrophils fromperipheralblood blood
21 chr10:28341800-28349800 Strong transcription Primary monocytes fromperipheralblood blood
22 chr10:28342200-28345000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr10:28342400-28345000 Enhancers Hela-S3 cervix
24 chr10:28342400-28348400 Strong transcription Primary T helper naive cells fromperipheralblood blood
25 chr10:28342600-28344800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr10:28342600-28345000 Weak transcription Stomach Smooth Muscle stomach
27 chr10:28342600-28350000 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr10:28342800-28345000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr10:28342800-28347000 Weak transcription HMEC breast
30 chr10:28343000-28345000 Weak transcription Primary B cells from cord blood blood
31 chr10:28343200-28344800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr10:28343200-28344800 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr10:28343200-28345000 Weak transcription Primary T cells fromperipheralblood blood
34 chr10:28343200-28345400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr10:28343400-28345000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr10:28343400-28345000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr10:28343600-28345400 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr10:28343600-28345800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr10:28343600-28346200 Weak transcription Fetal Intestine Large intestine
40 chr10:28343600-28346400 Weak transcription H1 Cell Line embryonic stem cell
41 chr10:28343600-28346600 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr10:28343800-28345600 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr10:28343800-28345800 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr10:28343800-28346000 Weak transcription HepG2 liver
45 chr10:28343800-28346200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr10:28343800-28346600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr10:28344000-28345000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr10:28344000-28346000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr10:28344000-28346000 Weak transcription Rectal Smooth Muscle rectum
50 chr10:28344000-28346000 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015