The 2.0 version of rSNPBase

Variant report

Variant rs2246301
Chromosome Location chr12:106725212-106725213
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:106700600-106736000 Weak transcription Stomach Mucosa stomach
2 chr12:106704200-106729400 Weak transcription NHLF lung
3 chr12:106704200-106729800 Weak transcription Muscle Satellite Cultured Cells --
4 chr12:106704800-106726800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
5 chr12:106704800-106738800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr12:106705200-106743400 Strong transcription Primary T cells fromperipheralblood blood
7 chr12:106705400-106731600 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr12:106705400-106743200 Strong transcription Primary T helper cells fromperipheralblood blood
9 chr12:106705800-106725400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr12:106706000-106727800 Strong transcription Placenta Placenta
11 chr12:106707800-106726400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
12 chr12:106707800-106738800 Strong transcription Primary T helper cells PMA-I stimulated --
13 chr12:106707800-106738800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr12:106708000-106726800 Strong transcription Fetal Intestine Large intestine
15 chr12:106708000-106728200 Strong transcription Primary T helper naive cells fromperipheralblood blood
16 chr12:106708000-106740600 Strong transcription Primary T cells from cord blood blood
17 chr12:106708000-106741000 Strong transcription Primary B cells from peripheral blood blood
18 chr12:106708400-106728000 Strong transcription Thymus Thymus
19 chr12:106708600-106727000 Strong transcription Primary hematopoietic stem cells blood
20 chr12:106710000-106729800 Weak transcription Hela-S3 cervix
21 chr12:106710400-106725400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr12:106712000-106732600 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr12:106713400-106741600 Weak transcription Small Intestine intestine
24 chr12:106716200-106725400 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr12:106716400-106735400 Weak transcription Right Atrium heart
26 chr12:106716600-106729800 Weak transcription HepG2 liver
27 chr12:106716800-106735400 Weak transcription Esophagus oesophagus
28 chr12:106716800-106736000 Weak transcription Gastric stomach
29 chr12:106717000-106729200 Weak transcription Placenta Amnion Placenta Amnion
30 chr12:106717000-106735600 Weak transcription HSMMtube muscle
31 chr12:106717800-106729800 Weak transcription NHDF-Ad bronchial
32 chr12:106719600-106735400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr12:106720200-106735400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr12:106720200-106736000 Weak transcription Fetal Intestine Small intestine
35 chr12:106720200-106736200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr12:106720400-106729800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr12:106720800-106725600 Weak transcription Fetal Muscle Leg muscle
38 chr12:106720800-106730800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr12:106720800-106738200 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr12:106721200-106731000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr12:106721400-106733600 Weak transcription Fetal Heart heart
42 chr12:106721800-106729800 Weak transcription Fetal Lung lung
43 chr12:106722000-106731000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr12:106722200-106725800 Strong transcription Aorta Aorta
45 chr12:106722400-106725400 Enhancers Skeletal Muscle Female skeletal muscle
46 chr12:106722400-106725800 Enhancers HUES48 Cell Line embryonic stem cell
47 chr12:106722400-106727000 Strong transcription Primary T helper naive cells from peripheral blood blood
48 chr12:106722600-106725600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr12:106722600-106725800 Strong transcription Primary T killer naive cells fromperipheralblood blood
50 chr12:106722600-106726000 Strong transcription Ovary ovary

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Last update: Aug 31, 2015