Variant report

Variant	rs73195636
Chromosome Location	chr12:106579022-106579023
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11112918	1.00[ASN][1000 genomes]
rs11112919	1.00[ASN][1000 genomes]
rs12823094	1.00[ASN][1000 genomes]
rs17216905	1.00[ASN][1000 genomes]
rs2243591	1.00[ASN][1000 genomes]
rs2246301	1.00[ASN][1000 genomes]
rs34221495	1.00[ASN][1000 genomes]
rs34334047	1.00[ASN][1000 genomes]
rs34397915	1.00[ASN][1000 genomes]
rs35336626	1.00[ASN][1000 genomes]
rs35463963	1.00[ASN][1000 genomes]
rs35769445	1.00[ASN][1000 genomes]
rs73388519	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040534	chr12:106528394-106619175	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:106573000-106580200	Weak transcription	Fetal Stomach	stomach
2	chr12:106573000-106581000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr12:106573000-106582000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr12:106573800-106580000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr12:106574600-106581000	Weak transcription	Ovary	ovary
6	chr12:106574600-106587000	Weak transcription	Psoas Muscle	Psoas
7	chr12:106577600-106581000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr12:106579000-106582000	Weak transcription	Fetal Muscle Trunk	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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