Variant report

Variant rs2246771
Chromosome Location chr3:195487737-195487738
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195477800-195488600 Strong transcription Rectal Mucosa Donor 31 rectum
2 chr3:195478400-195488600 Strong transcription Rectal Mucosa Donor 29 rectum
3 chr3:195479600-195492000 Strong transcription Sigmoid Colon Sigmoid Colon
4 chr3:195480200-195488000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr3:195484600-195488400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr3:195484600-195507800 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr3:195485000-195490200 Weak transcription H1 Cell Line embryonic stem cell
8 chr3:195485000-195517200 Weak transcription Right Atrium heart
9 chr3:195485600-195491600 Strong transcription Colonic Mucosa Colon
10 chr3:195486800-195488200 Enhancers Fetal Brain Male brain
11 chr3:195486800-195489000 Strong transcription Placenta Amnion Placenta Amnion
12 chr3:195487000-195488000 Enhancers Brain Hippocampus Middle brain
13 chr3:195487000-195488000 Enhancers Rectal Smooth Muscle rectum
14 chr3:195487000-195488200 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
15 chr3:195487000-195488800 Bivalent Enhancer Duodenum Smooth Muscle Duodenum
16 chr3:195487000-195492600 Bivalent Enhancer Fetal Stomach stomach
17 chr3:195487200-195488800 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
18 chr3:195487200-195489200 Bivalent Enhancer Fetal Muscle Trunk muscle
19 chr3:195487200-195489200 Enhancers Ovary ovary
20 chr3:195487200-195491400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
21 chr3:195487400-195488800 Enhancers Adipose Nuclei Adipose
22 chr3:195487600-195487800 Flanking Active TSS Colon Smooth Muscle Colon
23 chr3:195487600-195488000 Bivalent Enhancer Brain Inferior Temporal Lobe brain
24 chr3:195487600-195488200 Enhancers HSMMtube muscle
25 chr3:195487600-195488400 Bivalent Enhancer Brain Cingulate Gyrus brain
26 chr3:195487600-195488600 Bivalent Enhancer Stomach Smooth Muscle stomach
27 chr3:195487600-195490200 Bivalent Enhancer Fetal Muscle Leg muscle

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