Variant report

Variant rs2550275
Chromosome Location chr3:195486869-195486870
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195477800-195488600 Strong transcription Rectal Mucosa Donor 31 rectum
2 chr3:195478400-195488600 Strong transcription Rectal Mucosa Donor 29 rectum
3 chr3:195479600-195492000 Strong transcription Sigmoid Colon Sigmoid Colon
4 chr3:195480200-195488000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr3:195482600-195487600 Enhancers Fetal Muscle Leg muscle
6 chr3:195484600-195487200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr3:195484600-195487200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr3:195484600-195488400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr3:195484600-195507800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr3:195485000-195487200 Weak transcription Ovary ovary
11 chr3:195485000-195490200 Weak transcription H1 Cell Line embryonic stem cell
12 chr3:195485000-195517200 Weak transcription Right Atrium heart
13 chr3:195485200-195487000 Weak transcription Brain Germinal Matrix brain
14 chr3:195485200-195487000 Weak transcription Rectal Smooth Muscle rectum
15 chr3:195485600-195491600 Strong transcription Colonic Mucosa Colon
16 chr3:195486000-195487000 Enhancers Fetal Stomach stomach
17 chr3:195486400-195487600 Weak transcription HSMMtube muscle
18 chr3:195486800-195488200 Enhancers Fetal Brain Male brain
19 chr3:195486800-195489000 Strong transcription Placenta Amnion Placenta Amnion

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