Variant report

Variant rs2688524
Chromosome Location chr3:195484911-195484912
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195477800-195488600 Strong transcription Rectal Mucosa Donor 31 rectum
2 chr3:195478400-195488600 Strong transcription Rectal Mucosa Donor 29 rectum
3 chr3:195479600-195492000 Strong transcription Sigmoid Colon Sigmoid Colon
4 chr3:195480200-195488000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr3:195482600-195486000 Enhancers Fetal Brain Male brain
6 chr3:195482600-195487600 Enhancers Fetal Muscle Leg muscle
7 chr3:195483200-195485000 Enhancers Ovary ovary
8 chr3:195483200-195485200 Enhancers Adipose Nuclei Adipose
9 chr3:195483200-195486000 Enhancers Fetal Brain Female brain
10 chr3:195483800-195485000 Enhancers Spleen Spleen
11 chr3:195483800-195485000 Enhancers HMEC breast
12 chr3:195483800-195485200 Bivalent Enhancer Brain Hippocampus Middle brain
13 chr3:195483800-195485400 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
14 chr3:195484000-195485000 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
15 chr3:195484000-195485000 Enhancers Right Atrium heart
16 chr3:195484000-195485200 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
17 chr3:195484000-195485200 Bivalent Enhancer Brain Cingulate Gyrus brain
18 chr3:195484000-195485200 Enhancers Brain Germinal Matrix brain
19 chr3:195484000-195485200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
20 chr3:195484000-195485200 Bivalent Enhancer HUVEC blood vessel
21 chr3:195484000-195485400 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
22 chr3:195484200-195485000 Enhancers H1 Cell Line embryonic stem cell
23 chr3:195484200-195485000 Enhancers Fetal Heart heart
24 chr3:195484200-195486800 Weak transcription Placenta Amnion Placenta Amnion
25 chr3:195484400-195485000 Enhancers Brain Inferior Temporal Lobe brain
26 chr3:195484400-195485000 Enhancers Brain Substantia Nigra brain
27 chr3:195484400-195485400 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
28 chr3:195484400-195486400 Bivalent Enhancer Fetal Muscle Trunk muscle
29 chr3:195484600-195485000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
30 chr3:195484600-195485200 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
31 chr3:195484600-195485200 Bivalent Enhancer Fetal Thymus thymus
32 chr3:195484600-195485400 Bivalent Enhancer Fetal Stomach stomach
33 chr3:195484600-195485600 Weak transcription Colonic Mucosa Colon
34 chr3:195484600-195487200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr3:195484600-195487200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr3:195484600-195488400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr3:195484600-195507800 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr3:195484800-195485000 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
39 chr3:195484800-195485000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr3:195484800-195485000 Bivalent Enhancer Brain Angular Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links