Variant report
| Variant | rs2249589 |
|---|---|
| Chromosome Location | chr3:78680055-78680056 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:78642400-78692600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 2 | chr3:78646200-78683400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 3 | chr3:78647200-78701000 | Weak transcription | Spleen | Spleen |
| 4 | chr3:78647400-78694800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 5 | chr3:78648600-78686800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 6 | chr3:78649400-78681200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 7 | chr3:78652600-78684200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 8 | chr3:78653800-78682400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 9 | chr3:78654200-78682400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 10 | chr3:78654200-78696800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 11 | chr3:78654200-78708800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 12 | chr3:78654200-78746600 | Weak transcription | NHDF-Ad | bronchial |
| 13 | chr3:78654600-78697000 | Weak transcription | Osteobl | bone |
| 14 | chr3:78654800-78706800 | Weak transcription | NHLF | lung |
| 15 | chr3:78654800-78711000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 16 | chr3:78656000-78692800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 17 | chr3:78656000-78718600 | Weak transcription | Fetal Intestine Large | intestine |
| 18 | chr3:78656200-78684400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 19 | chr3:78656200-78687800 | Weak transcription | Primary T cells from cord blood | blood |
| 20 | chr3:78656200-78690800 | Weak transcription | HMEC | breast |
| 21 | chr3:78656200-78711000 | Weak transcription | Brain Hippocampus Middle | brain |
| 22 | chr3:78659400-78704400 | Weak transcription | Fetal Intestine Small | intestine |
| 23 | chr3:78659800-78682400 | Weak transcription | HSMMtube | muscle |
| 24 | chr3:78659800-78682400 | Weak transcription | NHEK | skin |
| 25 | chr3:78660400-78696800 | Weak transcription | HSMM | muscle |
| 26 | chr3:78663000-78682400 | Weak transcription | Brain Angular Gyrus | brain |
| 27 | chr3:78663400-78682800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 28 | chr3:78664000-78710200 | Weak transcription | Brain Substantia Nigra | brain |
| 29 | chr3:78664200-78692400 | Weak transcription | Fetal Brain Male | brain |
| 30 | chr3:78664400-78691600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 31 | chr3:78665400-78680200 | Weak transcription | Psoas Muscle | Psoas |
| 32 | chr3:78665400-78690400 | Weak transcription | Right Ventricle | heart |
| 33 | chr3:78665800-78692600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 34 | chr3:78667200-78681600 | Weak transcription | Adipose Nuclei | Adipose |
| 35 | chr3:78667200-78682400 | Weak transcription | Pancreas | Pancrea |
| 36 | chr3:78667200-78685000 | Weak transcription | Left Ventricle | heart |
| 37 | chr3:78667200-78702400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 38 | chr3:78667200-78704400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 39 | chr3:78667200-78706600 | Weak transcription | Gastric | stomach |
| 40 | chr3:78667200-78751200 | Weak transcription | Esophagus | oesophagus |
| 41 | chr3:78671800-78681800 | Strong transcription | Fetal Lung | lung |
| 42 | chr3:78672000-78693800 | Weak transcription | Fetal Heart | heart |
| 43 | chr3:78672600-78684800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 44 | chr3:78673000-78683200 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 45 | chr3:78673400-78683200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 46 | chr3:78673800-78694000 | Weak transcription | Liver | Liver |
| 47 | chr3:78674200-78683000 | Strong transcription | Fetal Brain Female | brain |
| 48 | chr3:78674800-78684600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 49 | chr3:78675200-78697000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 50 | chr3:78676200-78683200 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
