Variant report

Variant rs2253833
Chromosome Location chr7:107205669-107205670
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:107202200-107205800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
2 chr7:107203000-107205800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr7:107203200-107205800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
4 chr7:107203200-107206000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr7:107203400-107205800 Active TSS Breast Myoepithelial Primary Cells Breast
6 chr7:107204600-107205800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr7:107204800-107205800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr7:107204800-107205800 Flanking Active TSS Osteobl bone
9 chr7:107204800-107206000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr7:107204800-107206000 Flanking Active TSS NH-A brain
11 chr7:107204800-107206000 Flanking Active TSS NHEK skin
12 chr7:107204800-107210600 Weak transcription Spleen Spleen
13 chr7:107205000-107205800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr7:107205000-107205800 Flanking Active TSS Colon Smooth Muscle Colon
15 chr7:107205000-107205800 Flanking Active TSS GM12878-XiMat blood
16 chr7:107205000-107206000 Flanking Active TSS Dnd41 blood
17 chr7:107205000-107206200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr7:107205000-107210600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr7:107205000-107219600 Weak transcription Pancreas Pancrea
20 chr7:107205000-107220000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr7:107205000-107220000 Weak transcription Gastric stomach
22 chr7:107205000-107220200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr7:107205000-107220200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr7:107205200-107205800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
25 chr7:107205200-107205800 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr7:107205200-107206000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr7:107205200-107206000 Enhancers Cortex derived primary cultured neurospheres brain
28 chr7:107205200-107206200 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr7:107205200-107206400 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr7:107205200-107210400 Weak transcription Fetal Thymus thymus
31 chr7:107205200-107210600 Weak transcription Primary T cells fromperipheralblood blood
32 chr7:107205200-107210600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr7:107205200-107210600 Weak transcription Fetal Muscle Trunk muscle
34 chr7:107205200-107210600 Weak transcription Fetal Muscle Leg muscle
35 chr7:107205200-107210600 Weak transcription Placenta Placenta
36 chr7:107205200-107210600 Weak transcription Left Ventricle heart
37 chr7:107205200-107210800 Weak transcription Ovary ovary
38 chr7:107205200-107219600 Weak transcription Esophagus oesophagus
39 chr7:107205200-107219600 Weak transcription Right Ventricle heart
40 chr7:107205200-107220000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr7:107205200-107220000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr7:107205200-107220000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr7:107205200-107220000 Weak transcription Lung lung
44 chr7:107205200-107220000 Weak transcription Psoas Muscle Psoas
45 chr7:107205400-107205800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
46 chr7:107205400-107205800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr7:107205400-107205800 Enhancers Fetal Intestine Small intestine
48 chr7:107205400-107205800 Enhancers Rectal Mucosa Donor 29 rectum
49 chr7:107205400-107205800 Weak transcription Thymus Thymus
50 chr7:107205400-107206000 Enhancers Brain Hippocampus Middle brain

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