Variant report

Variant rs2254326
Chromosome Location chr19:41255889-41255890
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41246200-41256000 Weak transcription Aorta Aorta
2 chr19:41251600-41256000 Weak transcription Ovary ovary
3 chr19:41254400-41256000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr19:41254400-41256000 Enhancers Placenta Amnion Placenta Amnion
5 chr19:41254400-41256000 Enhancers Spleen Spleen
6 chr19:41254600-41259200 Active TSS iPS-15b Cell Line embryonic stem cell
7 chr19:41255200-41256000 Enhancers Primary T cells fromperipheralblood blood
8 chr19:41255200-41256000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr19:41255200-41256000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
10 chr19:41255200-41256200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr19:41255200-41256200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
12 chr19:41255200-41256200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
13 chr19:41255200-41256200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
14 chr19:41255200-41256200 Flanking Active TSS Stomach Smooth Muscle stomach
15 chr19:41255200-41256200 Flanking Active TSS A549 lung
16 chr19:41255200-41256200 Flanking Active TSS Hela-S3 cervix
17 chr19:41255200-41256200 Flanking Active TSS K562 blood
18 chr19:41255200-41256400 Flanking Active TSS HMEC breast
19 chr19:41255200-41256400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
20 chr19:41255400-41256000 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr19:41255400-41256000 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr19:41255400-41256000 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr19:41255400-41256000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
24 chr19:41255400-41256000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr19:41255400-41256000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
26 chr19:41255400-41256000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr19:41255400-41256000 Flanking Active TSS Liver Liver
28 chr19:41255400-41256000 Flanking Active TSS Brain Substantia Nigra brain
29 chr19:41255400-41256000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
30 chr19:41255400-41256200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr19:41255400-41256200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
32 chr19:41255400-41256200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr19:41255400-41256200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
34 chr19:41255400-41256200 Flanking Active TSS Brain Cingulate Gyrus brain
35 chr19:41255400-41256200 Flanking Active TSS Brain Germinal Matrix brain
36 chr19:41255400-41256200 Flanking Active TSS Colon Smooth Muscle Colon
37 chr19:41255400-41256200 Flanking Active TSS Duodenum Mucosa Duodenum
38 chr19:41255400-41256200 Flanking Active TSS Duodenum Smooth Muscle Duodenum
39 chr19:41255400-41256200 Flanking Active TSS Fetal Brain Female brain
40 chr19:41255400-41256200 Flanking Active TSS Fetal Intestine Large intestine
41 chr19:41255400-41256200 Flanking Active TSS Stomach Mucosa stomach
42 chr19:41255400-41256200 Flanking Active TSS HSMMtube muscle
43 chr19:41255400-41256200 Flanking Active TSS NHEK skin
44 chr19:41255400-41256400 Flanking Active TSS Primary monocytes fromperipheralblood blood
45 chr19:41255400-41256400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
46 chr19:41255400-41256400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr19:41255400-41256400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr19:41255400-41258200 Active TSS HUES48 Cell Line embryonic stem cell
49 chr19:41255400-41258200 Active TSS HUES64 Cell Line embryonic stem cell
50 chr19:41255400-41258600 Active TSS H9 Cell Line embryonic stem cell

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