The 2.0 version of rSNPBase

Variant report

Variant rs2545777
Chromosome Location chr19:41287809-41287810
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41285000-41292400 Weak transcription Ovary ovary
2 chr19:41285000-41303800 Weak transcription Small Intestine intestine
3 chr19:41285000-41304000 Weak transcription Psoas Muscle Psoas
4 chr19:41285200-41288000 Weak transcription Brain Hippocampus Middle brain
5 chr19:41285200-41289800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr19:41285200-41289800 Weak transcription Adipose Nuclei Adipose
7 chr19:41285200-41289800 Weak transcription Brain Angular Gyrus brain
8 chr19:41285200-41289800 Weak transcription Brain Substantia Nigra brain
9 chr19:41285200-41289800 Weak transcription Fetal Muscle Leg muscle
10 chr19:41285200-41290200 Weak transcription Fetal Muscle Trunk muscle
11 chr19:41285200-41291600 Weak transcription Esophagus oesophagus
12 chr19:41285200-41292200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr19:41285200-41292400 Weak transcription Brain Germinal Matrix brain
14 chr19:41285200-41292400 Weak transcription Left Ventricle heart
15 chr19:41285200-41295600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr19:41285200-41295600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr19:41285200-41298000 Weak transcription Fetal Lung lung
18 chr19:41285200-41303200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr19:41285200-41303400 Weak transcription Pancreas Pancrea
20 chr19:41285200-41303600 Weak transcription Placenta Amnion Placenta Amnion
21 chr19:41285200-41303800 Weak transcription Muscle Satellite Cultured Cells --
22 chr19:41285200-41304000 Weak transcription HSMM muscle
23 chr19:41285400-41288000 Weak transcription Primary monocytes fromperipheralblood blood
24 chr19:41285400-41288000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr19:41285400-41288000 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr19:41285400-41289400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr19:41285400-41289600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr19:41285400-41289800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr19:41285400-41289800 Weak transcription Fetal Intestine Large intestine
30 chr19:41285400-41290200 Weak transcription Duodenum Mucosa Duodenum
31 chr19:41285400-41291000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr19:41285400-41291400 Weak transcription A549 lung
33 chr19:41285400-41291600 Weak transcription Fetal Brain Female brain
34 chr19:41285400-41292200 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr19:41285400-41292200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr19:41285400-41292200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr19:41285400-41292400 Weak transcription Rectal Smooth Muscle rectum
38 chr19:41285400-41292600 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr19:41285400-41292600 Weak transcription Colonic Mucosa Colon
40 chr19:41285400-41293400 Weak transcription Liver Liver
41 chr19:41285400-41295600 Weak transcription Right Ventricle heart
42 chr19:41285400-41296800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr19:41285400-41297000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr19:41285400-41297400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr19:41285400-41297400 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr19:41285400-41297600 Weak transcription Stomach Mucosa stomach
47 chr19:41285400-41297800 Weak transcription NHDF-Ad bronchial
48 chr19:41285400-41298000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr19:41285400-41302400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr19:41285400-41303400 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015