The 2.0 version of rSNPBase

Variant report

Variant rs2604909
Chromosome Location chr19:41297615-41297616
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41285000-41303800 Weak transcription Small Intestine intestine
2 chr19:41285000-41304000 Weak transcription Psoas Muscle Psoas
3 chr19:41285200-41298000 Weak transcription Fetal Lung lung
4 chr19:41285200-41303200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:41285200-41303400 Weak transcription Pancreas Pancrea
6 chr19:41285200-41303600 Weak transcription Placenta Amnion Placenta Amnion
7 chr19:41285200-41303800 Weak transcription Muscle Satellite Cultured Cells --
8 chr19:41285200-41304000 Weak transcription HSMM muscle
9 chr19:41285400-41297800 Weak transcription NHDF-Ad bronchial
10 chr19:41285400-41298000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr19:41285400-41302400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr19:41285400-41303400 Weak transcription H9 Cell Line embryonic stem cell
13 chr19:41285400-41303400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr19:41285400-41303400 Weak transcription Primary hematopoietic stem cells blood
15 chr19:41285400-41303400 Weak transcription Colon Smooth Muscle Colon
16 chr19:41285400-41303400 Weak transcription HMEC breast
17 chr19:41285400-41303400 Weak transcription Osteobl bone
18 chr19:41285400-41303600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr19:41285400-41303600 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr19:41285400-41303600 Weak transcription NHEK skin
21 chr19:41285400-41303800 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr19:41285400-41303800 Weak transcription NH-A brain
23 chr19:41285400-41304000 Weak transcription HSMMtube muscle
24 chr19:41286000-41299200 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr19:41286000-41299400 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr19:41286000-41300000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
27 chr19:41286000-41303600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr19:41286200-41303400 Weak transcription K562 blood
29 chr19:41286200-41303800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr19:41286200-41304000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr19:41286400-41303400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr19:41286400-41303400 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr19:41286400-41303800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr19:41286600-41298400 Strong transcription Spleen Spleen
35 chr19:41286800-41297800 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr19:41286800-41298400 Strong transcription Thymus Thymus
37 chr19:41287200-41299000 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr19:41287400-41299000 Strong transcription Fetal Stomach stomach
39 chr19:41287600-41297800 Weak transcription GM12878-XiMat blood
40 chr19:41287600-41303600 Weak transcription NHLF lung
41 chr19:41288000-41299200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr19:41288000-41299800 Strong transcription Primary monocytes fromperipheralblood blood
43 chr19:41290800-41298200 Weak transcription Fetal Kidney kidney
44 chr19:41291800-41297800 Weak transcription A549 lung
45 chr19:41292000-41298400 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr19:41293000-41298000 Weak transcription Aorta Aorta
47 chr19:41293000-41298400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr19:41293000-41302000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr19:41293000-41302000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr19:41293000-41303600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015