Variant report

Variant rs225629
Chromosome Location chr6:142473961-142473962
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:142468800-142488000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:142469200-142477000 Weak transcription Stomach Mucosa stomach
3 chr6:142469200-142483400 Weak transcription Aorta Aorta
4 chr6:142469200-142487800 Weak transcription Fetal Muscle Trunk muscle
5 chr6:142469600-142487800 Weak transcription Fetal Muscle Leg muscle
6 chr6:142469600-142487800 Weak transcription Thymus Thymus
7 chr6:142469800-142481200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr6:142469800-142487600 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr6:142470000-142476600 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr6:142470000-142477000 Weak transcription Rectal Smooth Muscle rectum
11 chr6:142470000-142477200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr6:142470000-142481400 Weak transcription Gastric stomach
13 chr6:142470000-142484000 Weak transcription Psoas Muscle Psoas
14 chr6:142470000-142486400 Weak transcription Fetal Intestine Small intestine
15 chr6:142470200-142474000 Weak transcription NH-A brain
16 chr6:142470200-142484000 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr6:142470200-142487800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr6:142470200-142488200 Weak transcription Brain Inferior Temporal Lobe brain
19 chr6:142470200-142488200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr6:142470200-142491800 Weak transcription Fetal Stomach stomach
21 chr6:142470200-142493600 Weak transcription HSMMtube muscle
22 chr6:142470200-142504000 Weak transcription Spleen Spleen
23 chr6:142470400-142474000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr6:142470400-142476200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr6:142470400-142476600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr6:142470400-142476800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr6:142470400-142476800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr6:142470400-142477000 Weak transcription Adipose Nuclei Adipose
29 chr6:142470400-142477000 Weak transcription Brain Substantia Nigra brain
30 chr6:142470400-142477000 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr6:142470400-142477000 Weak transcription HSMM muscle
32 chr6:142470400-142487400 Weak transcription Duodenum Mucosa Duodenum
33 chr6:142470400-142487600 Weak transcription Primary monocytes fromperipheralblood blood
34 chr6:142470400-142487600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr6:142470400-142487600 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr6:142470600-142474000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr6:142470600-142475000 Weak transcription Fetal Brain Male brain
38 chr6:142470600-142476000 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr6:142470600-142476800 Weak transcription K562 blood
40 chr6:142470600-142477000 Weak transcription H1 Cell Line embryonic stem cell
41 chr6:142470600-142477000 Weak transcription Primary hematopoietic stem cells blood
42 chr6:142470600-142477200 Weak transcription Small Intestine intestine
43 chr6:142470600-142483800 Weak transcription Fetal Lung lung
44 chr6:142470600-142486000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr6:142470600-142487600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr6:142470800-142476800 Weak transcription GM12878-XiMat blood
47 chr6:142470800-142477000 Weak transcription Brain Angular Gyrus brain
48 chr6:142470800-142481400 Weak transcription Brain Hippocampus Middle brain
49 chr6:142470800-142487600 Weak transcription Fetal Intestine Large intestine
50 chr6:142470800-142487800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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