The 2.0 version of rSNPBase

Variant report

Variant rs225650
Chromosome Location chr6:142483863-142483864
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:142468800-142488000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:142469200-142487800 Weak transcription Fetal Muscle Trunk muscle
3 chr6:142469600-142487800 Weak transcription Fetal Muscle Leg muscle
4 chr6:142469600-142487800 Weak transcription Thymus Thymus
5 chr6:142469800-142487600 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr6:142470000-142484000 Weak transcription Psoas Muscle Psoas
7 chr6:142470000-142486400 Weak transcription Fetal Intestine Small intestine
8 chr6:142470200-142484000 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr6:142470200-142487800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr6:142470200-142488200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr6:142470200-142488200 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr6:142470200-142491800 Weak transcription Fetal Stomach stomach
13 chr6:142470200-142493600 Weak transcription HSMMtube muscle
14 chr6:142470200-142504000 Weak transcription Spleen Spleen
15 chr6:142470400-142487400 Weak transcription Duodenum Mucosa Duodenum
16 chr6:142470400-142487600 Weak transcription Primary monocytes fromperipheralblood blood
17 chr6:142470400-142487600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr6:142470400-142487600 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr6:142470600-142486000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr6:142470600-142487600 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr6:142470800-142487600 Weak transcription Fetal Intestine Large intestine
22 chr6:142470800-142487800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:142471600-142485600 Weak transcription Brain Germinal Matrix brain
24 chr6:142472000-142487600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr6:142472400-142487800 Weak transcription Left Ventricle heart
26 chr6:142472400-142487800 Weak transcription Ovary ovary
27 chr6:142472400-142488200 Weak transcription Primary B cells from cord blood blood
28 chr6:142472800-142487000 Weak transcription Fetal Thymus thymus
29 chr6:142472800-142487200 Weak transcription Dnd41 blood
30 chr6:142472800-142487600 Weak transcription Primary B cells from peripheral blood blood
31 chr6:142473200-142487800 Weak transcription Lung lung
32 chr6:142474200-142487600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr6:142474600-142487000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr6:142474600-142500800 Weak transcription Brain Cingulate Gyrus brain
35 chr6:142474800-142506800 Weak transcription Hela-S3 cervix
36 chr6:142475200-142487800 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr6:142477000-142487800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr6:142477200-142486800 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr6:142477200-142500600 Weak transcription Fetal Brain Male brain
40 chr6:142477400-142486000 Weak transcription Brain Angular Gyrus brain
41 chr6:142477400-142487800 Weak transcription H1 Cell Line embryonic stem cell
42 chr6:142477400-142487800 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr6:142477400-142487800 Weak transcription Adipose Nuclei Adipose
44 chr6:142477400-142487800 Weak transcription HSMM muscle
45 chr6:142477400-142488600 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr6:142477600-142487400 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr6:142477600-142487600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr6:142477600-142487600 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr6:142477600-142487800 Weak transcription Rectal Smooth Muscle rectum
50 chr6:142477600-142488000 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015