Variant report

Variant rs225680
Chromosome Location chr6:142520393-142520394
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:142484200-142533800 Weak transcription Aorta Aorta
2 chr6:142489000-142543200 Weak transcription Small Intestine intestine
3 chr6:142492200-142524800 Weak transcription Brain Angular Gyrus brain
4 chr6:142495600-142533600 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr6:142496000-142525000 Weak transcription Stomach Smooth Muscle stomach
6 chr6:142496000-142528600 Weak transcription Lung lung
7 chr6:142496200-142527600 Weak transcription Thymus Thymus
8 chr6:142496200-142528200 Weak transcription Fetal Stomach stomach
9 chr6:142496200-142528400 Weak transcription Brain Germinal Matrix brain
10 chr6:142496200-142533800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr6:142496200-142533800 Weak transcription Gastric stomach
12 chr6:142496200-142533800 Weak transcription Pancreas Pancrea
13 chr6:142496400-142528000 Weak transcription Fetal Muscle Trunk muscle
14 chr6:142496400-142533600 Weak transcription Colonic Mucosa Colon
15 chr6:142496600-142525800 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr6:142496600-142526200 Weak transcription Esophagus oesophagus
17 chr6:142496600-142533800 Weak transcription Left Ventricle heart
18 chr6:142496600-142546800 Weak transcription NHLF lung
19 chr6:142498200-142526000 Weak transcription Fetal Intestine Small intestine
20 chr6:142498600-142527800 Weak transcription Ovary ovary
21 chr6:142499200-142524800 Weak transcription HSMMtube muscle
22 chr6:142499600-142521000 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr6:142499600-142521200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr6:142501400-142522400 Weak transcription K562 blood
25 chr6:142502000-142527800 Weak transcription Fetal Muscle Leg muscle
26 chr6:142507800-142533800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr6:142508200-142525000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr6:142509200-142526000 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr6:142510400-142534000 Weak transcription Placenta Amnion Placenta Amnion
30 chr6:142510400-142534200 Weak transcription Brain Cingulate Gyrus brain
31 chr6:142510800-142534600 Weak transcription Hela-S3 cervix
32 chr6:142513200-142528400 Weak transcription Brain Substantia Nigra brain
33 chr6:142513400-142533600 Weak transcription Rectal Smooth Muscle rectum
34 chr6:142513600-142527400 Weak transcription Brain Hippocampus Middle brain
35 chr6:142513600-142527800 Weak transcription Brain Inferior Temporal Lobe brain
36 chr6:142515400-142541800 Weak transcription Psoas Muscle Psoas
37 chr6:142517200-142535400 Weak transcription Colon Smooth Muscle Colon
38 chr6:142517400-142533400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr6:142517400-142533800 Weak transcription H9 Cell Line embryonic stem cell
40 chr6:142517600-142526200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr6:142517600-142527000 Weak transcription A549 lung
42 chr6:142517600-142528200 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr6:142517600-142533200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr6:142517800-142521200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr6:142517800-142526000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr6:142517800-142527800 Weak transcription NHEK skin
47 chr6:142517800-142533000 Weak transcription NH-A brain
48 chr6:142517800-142533200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr6:142517800-142533600 Weak transcription Right Ventricle heart
50 chr6:142518000-142533800 Weak transcription Pancreatic Islets Pancreatic Islet

Quick Search:


  
Input of quick search could be:

what's new

Quick links