The 2.0 version of rSNPBase

Variant report

Variant rs225706
Chromosome Location chr6:142536258-142536259
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:142489000-142543200 Weak transcription Small Intestine intestine
2 chr6:142496600-142546800 Weak transcription NHLF lung
3 chr6:142515400-142541800 Weak transcription Psoas Muscle Psoas
4 chr6:142519600-142541800 Strong transcription HSMM muscle
5 chr6:142521600-142542600 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr6:142523000-142543000 Weak transcription Stomach Mucosa stomach
7 chr6:142531000-142536400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr6:142531000-142537200 Strong transcription Liver Liver
9 chr6:142531400-142537200 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr6:142532400-142543000 Weak transcription Fetal Brain Male brain
11 chr6:142533200-142543200 Weak transcription HMEC breast
12 chr6:142533800-142541600 Weak transcription K562 blood
13 chr6:142534000-142538000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr6:142534200-142541600 Weak transcription Fetal Kidney kidney
15 chr6:142534400-142536400 Weak transcription Placenta Amnion Placenta Amnion
16 chr6:142534800-142537400 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr6:142534800-142538200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr6:142534800-142539600 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr6:142534800-142543400 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr6:142535000-142536400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr6:142535000-142536600 Weak transcription Right Ventricle heart
22 chr6:142535000-142536600 Strong transcription HepG2 liver
23 chr6:142535000-142536800 Strong transcription Primary B cells from cord blood blood
24 chr6:142535000-142536800 Weak transcription Spleen Spleen
25 chr6:142535000-142537200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr6:142535000-142539200 Weak transcription Brain Angular Gyrus brain
27 chr6:142535000-142539200 Weak transcription Brain Anterior Caudate brain
28 chr6:142535000-142539200 Weak transcription Brain Hippocampus Middle brain
29 chr6:142535000-142539200 Weak transcription Brain Substantia Nigra brain
30 chr6:142535000-142539400 Weak transcription Muscle Satellite Cultured Cells --
31 chr6:142535000-142539600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr6:142535000-142539600 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr6:142535000-142540200 Weak transcription Colonic Mucosa Colon
34 chr6:142535000-142540800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr6:142535000-142541400 Strong transcription Primary monocytes fromperipheralblood blood
36 chr6:142535000-142541600 Weak transcription H9 Cell Line embryonic stem cell
37 chr6:142535000-142541600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr6:142535000-142542000 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr6:142535000-142542200 Weak transcription Lung lung
40 chr6:142535000-142542600 Weak transcription Gastric stomach
41 chr6:142535000-142543200 Weak transcription NHEK skin
42 chr6:142535000-142544400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr6:142535000-142544800 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr6:142535000-142545000 Weak transcription Esophagus oesophagus
45 chr6:142535000-142545600 Weak transcription Aorta Aorta
46 chr6:142535000-142548800 Weak transcription NH-A brain
47 chr6:142535200-142536400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr6:142535200-142536600 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr6:142535200-142536800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr6:142535200-142537000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015