The 2.0 version of rSNPBase

Variant report

Variant rs225696
Chromosome Location chr6:142529205-142529206
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:142484200-142533800 Weak transcription Aorta Aorta
2 chr6:142489000-142543200 Weak transcription Small Intestine intestine
3 chr6:142495600-142533600 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr6:142496200-142533800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr6:142496200-142533800 Weak transcription Gastric stomach
6 chr6:142496200-142533800 Weak transcription Pancreas Pancrea
7 chr6:142496400-142533600 Weak transcription Colonic Mucosa Colon
8 chr6:142496600-142533800 Weak transcription Left Ventricle heart
9 chr6:142496600-142546800 Weak transcription NHLF lung
10 chr6:142507800-142533800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:142510400-142534000 Weak transcription Placenta Amnion Placenta Amnion
12 chr6:142510400-142534200 Weak transcription Brain Cingulate Gyrus brain
13 chr6:142510800-142534600 Weak transcription Hela-S3 cervix
14 chr6:142513400-142533600 Weak transcription Rectal Smooth Muscle rectum
15 chr6:142515400-142541800 Weak transcription Psoas Muscle Psoas
16 chr6:142517200-142535400 Weak transcription Colon Smooth Muscle Colon
17 chr6:142517400-142533400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr6:142517400-142533800 Weak transcription H9 Cell Line embryonic stem cell
19 chr6:142517600-142533200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr6:142517800-142533000 Weak transcription NH-A brain
21 chr6:142517800-142533200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr6:142517800-142533600 Weak transcription Right Ventricle heart
23 chr6:142518000-142533800 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr6:142518000-142534400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr6:142518000-142534400 Weak transcription Spleen Spleen
26 chr6:142518200-142533000 Weak transcription H1 Cell Line embryonic stem cell
27 chr6:142518800-142530200 Strong transcription Rectal Mucosa Donor 29 rectum
28 chr6:142518800-142533800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr6:142519000-142534400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr6:142519200-142533600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr6:142519600-142533000 Strong transcription HUES64 Cell Line embryonic stem cell
32 chr6:142519600-142533800 Strong transcription Fetal Thymus thymus
33 chr6:142519600-142535200 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr6:142519600-142541800 Strong transcription HSMM muscle
35 chr6:142520200-142533400 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr6:142520400-142532200 Weak transcription HMEC breast
37 chr6:142520400-142533600 Weak transcription Brain Anterior Caudate brain
38 chr6:142521400-142531400 Weak transcription Osteobl bone
39 chr6:142521600-142542600 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr6:142521800-142529600 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr6:142521800-142531000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr6:142522200-142531400 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr6:142523000-142543000 Weak transcription Stomach Mucosa stomach
44 chr6:142523200-142529400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
45 chr6:142523200-142529400 Weak transcription Fetal Brain Male brain
46 chr6:142523200-142534600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr6:142523800-142531000 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr6:142524400-142533600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr6:142524800-142529800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr6:142524800-142529800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015