Variant report

Variant	rs2277884
Chromosome Location	chr2:114035750-114035751
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:114033208..114035776-chr2:114039656..114042402,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs6756626	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73955197	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508162	chr2:113983043-114099966	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
2	nsv535895	chr2:114015492-114037018	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv874901	chr2:114022569-114079565	Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv998204	chr2:114023917-114075446	Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:63 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114023200-114039800	Weak transcription	Gastric	stomach
2	chr2:114031600-114037000	Bivalent/Poised TSS	Fetal Kidney	kidney
3	chr2:114032800-114035800	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
4	chr2:114033000-114035800	Bivalent Enhancer	Primary B cells from peripheral blood	blood
5	chr2:114033000-114036600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
6	chr2:114033000-114038000	Weak transcription	A549	lung
7	chr2:114033200-114036000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
8	chr2:114033400-114036000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr2:114033400-114036000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
10	chr2:114033400-114036400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
11	chr2:114033400-114036400	Bivalent Enhancer	Fetal Brain Male	brain
12	chr2:114033400-114036600	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
13	chr2:114033600-114036000	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
14	chr2:114033600-114036400	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr2:114033600-114036400	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr2:114033600-114037200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
17	chr2:114034000-114036200	Transcr. at gene 5' and 3'	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr2:114034200-114036600	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
19	chr2:114034200-114036600	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr2:114034400-114035800	Bivalent Enhancer	Esophagus	oesophagus
21	chr2:114034400-114035800	Flanking Bivalent TSS/Enh	Right Ventricle	heart
22	chr2:114034400-114036000	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
23	chr2:114034400-114036000	Bivalent Enhancer	Fetal Muscle Leg	muscle
24	chr2:114034400-114036200	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
25	chr2:114034600-114035800	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr2:114034600-114035800	Bivalent Enhancer	Fetal Stomach	stomach
27	chr2:114034600-114036000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr2:114034600-114036000	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
29	chr2:114034600-114036000	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr2:114034600-114036000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr2:114034600-114036000	Bivalent Enhancer	Fetal Lung	lung
32	chr2:114034600-114036200	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
33	chr2:114034600-114036400	Bivalent Enhancer	Placenta Amnion	Placenta Amnion
34	chr2:114034800-114035800	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
35	chr2:114034800-114035800	Enhancers	Liver	Liver
36	chr2:114034800-114036000	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
37	chr2:114034800-114036800	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
38	chr2:114035000-114035800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells	blood
39	chr2:114035000-114035800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr2:114035000-114035800	Bivalent Enhancer	Fetal Intestine Large	intestine
41	chr2:114035200-114035800	Bivalent/Poised TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
42	chr2:114035200-114035800	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
43	chr2:114035200-114035800	Bivalent Enhancer	Adipose Nuclei	Adipose
44	chr2:114035200-114035800	Bivalent Enhancer	Fetal Intestine Small	intestine
45	chr2:114035200-114036000	Bivalent Enhancer	Fetal Heart	heart
46	chr2:114035400-114035800	Bivalent Enhancer	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr2:114035400-114036000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr2:114035400-114036600	Weak transcription	HepG2	liver
49	chr2:114035600-114035800	Flanking Bivalent TSS/Enh	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr2:114035600-114035800	Bivalent Enhancer	Primary T cells from cord blood	blood

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