Variant report

Variant rs2279231
Chromosome Location chr5:180264448-180264449
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180259000-180272600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:180259400-180271400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr5:180259400-180273600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr5:180259600-180264600 Weak transcription HMEC breast
5 chr5:180259600-180272400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr5:180259600-180272600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr5:180259800-180276800 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr5:180260000-180268800 Weak transcription Brain Germinal Matrix brain
9 chr5:180260000-180271400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr5:180260000-180273200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr5:180260000-180273800 Weak transcription Fetal Kidney kidney
12 chr5:180260000-180274400 Weak transcription Muscle Satellite Cultured Cells --
13 chr5:180260000-180274400 Weak transcription NHDF-Ad bronchial
14 chr5:180260000-180276200 Weak transcription Stomach Mucosa stomach
15 chr5:180260200-180267400 Weak transcription Fetal Heart heart
16 chr5:180261000-180264800 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr5:180261000-180265000 Strong transcription Primary hematopoietic stem cells short term culture blood
18 chr5:180261000-180265400 Strong transcription Primary monocytes fromperipheralblood blood
19 chr5:180261000-180265400 Strong transcription Primary B cells from cord blood blood
20 chr5:180261000-180265400 Strong transcription Fetal Muscle Trunk muscle
21 chr5:180261000-180265400 Strong transcription Left Ventricle heart
22 chr5:180261000-180265400 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr5:180261200-180264600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr5:180261200-180264600 Strong transcription Primary hematopoietic stem cells blood
25 chr5:180261200-180265000 Strong transcription Duodenum Mucosa Duodenum
26 chr5:180261200-180265200 Strong transcription Brain Anterior Caudate brain
27 chr5:180261200-180265200 Strong transcription Brain Inferior Temporal Lobe brain
28 chr5:180261200-180265200 Strong transcription Placenta Placenta
29 chr5:180261200-180265400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr5:180261200-180265400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr5:180261200-180265400 Strong transcription Liver Liver
32 chr5:180261200-180265600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr5:180261200-180265600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr5:180261400-180264600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr5:180261400-180264600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr5:180261400-180264600 Strong transcription Aorta Aorta
37 chr5:180261400-180264600 Strong transcription Skeletal Muscle Male skeletal muscle
38 chr5:180261400-180264600 Strong transcription Thymus Thymus
39 chr5:180261400-180264800 Strong transcription Brain Hippocampus Middle brain
40 chr5:180261400-180264800 Strong transcription Esophagus oesophagus
41 chr5:180261400-180264800 Strong transcription Gastric stomach
42 chr5:180261400-180264800 Strong transcription Skeletal Muscle Female skeletal muscle
43 chr5:180261400-180265000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
44 chr5:180261400-180265400 Strong transcription Brain Cingulate Gyrus brain
45 chr5:180261400-180265400 Strong transcription Fetal Stomach stomach
46 chr5:180261600-180264600 Strong transcription Colon Smooth Muscle Colon
47 chr5:180261600-180264600 Strong transcription Rectal Mucosa Donor 31 rectum
48 chr5:180261600-180264800 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr5:180261600-180265000 Strong transcription Right Ventricle heart
50 chr5:180261600-180265200 Strong transcription Duodenum Smooth Muscle Duodenum

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