Variant report

Variant rs2284798
Chromosome Location chr1:85814578-85814579
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85798800-85824800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:85798800-85824800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:85800400-85815000 Weak transcription Fetal Intestine Small intestine
4 chr1:85806400-85815800 Weak transcription Pancreas Pancrea
5 chr1:85808200-85815800 Weak transcription Aorta Aorta
6 chr1:85808400-85816000 Weak transcription H9 Cell Line embryonic stem cell
7 chr1:85809000-85815800 Weak transcription Ovary ovary
8 chr1:85809200-85814800 Weak transcription Fetal Stomach stomach
9 chr1:85809200-85826000 Weak transcription Fetal Brain Female brain
10 chr1:85809200-85838400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr1:85809400-85826800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr1:85809400-85826800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:85809600-85828800 Weak transcription Brain Anterior Caudate brain
14 chr1:85809800-85814800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:85809800-85815200 Weak transcription Stomach Smooth Muscle stomach
16 chr1:85809800-85819000 Weak transcription Brain Angular Gyrus brain
17 chr1:85809800-85825400 Weak transcription Rectal Smooth Muscle rectum
18 chr1:85809800-85826000 Weak transcription Stomach Mucosa stomach
19 chr1:85810200-85814600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:85810200-85816800 Weak transcription Colon Smooth Muscle Colon
21 chr1:85810200-85823600 Weak transcription Primary hematopoietic stem cells blood
22 chr1:85810400-85814600 Weak transcription Hela-S3 cervix
23 chr1:85810400-85815000 Weak transcription Esophagus oesophagus
24 chr1:85810400-85815800 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:85810600-85815000 Weak transcription Adipose Nuclei Adipose
26 chr1:85810600-85815000 Weak transcription HMEC breast
27 chr1:85810600-85819600 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr1:85810600-85825000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:85811000-85819600 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr1:85811200-85815000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:85811200-85818600 Strong transcription HSMM muscle
32 chr1:85811200-85819600 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr1:85811200-85822800 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr1:85811400-85818000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:85811600-85818200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:85812000-85816200 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:85812000-85818400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr1:85813200-85816200 Strong transcription Cortex derived primary cultured neurospheres brain
39 chr1:85813200-85816600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:85813200-85817000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:85813200-85818000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:85813200-85818800 Strong transcription Osteobl bone
43 chr1:85813400-85816600 Strong transcription Fetal Muscle Trunk muscle
44 chr1:85813400-85816800 Weak transcription Brain Inferior Temporal Lobe brain
45 chr1:85813400-85817000 Strong transcription NHDF-Ad bronchial
46 chr1:85813400-85817200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:85813600-85816200 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr1:85813600-85816600 Strong transcription Muscle Satellite Cultured Cells --
49 chr1:85813600-85816600 Strong transcription Fetal Muscle Leg muscle
50 chr1:85813600-85816600 Strong transcription Rectal Mucosa Donor 31 rectum

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