Variant report

Variant rs12116463
Chromosome Location chr1:85853705-85853706
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85839800-85864200 Weak transcription Aorta Aorta
2 chr1:85841200-85859800 Weak transcription NH-A brain
3 chr1:85845000-85870000 Weak transcription HSMMtube muscle
4 chr1:85845800-85859800 Weak transcription NHLF lung
5 chr1:85849400-85861600 Weak transcription Muscle Satellite Cultured Cells --
6 chr1:85849400-85863400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:85850200-85854400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:85850800-85853800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:85850800-85863600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:85851400-85853800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
11 chr1:85851600-85854600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:85852000-85853800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
13 chr1:85852400-85863400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:85852400-85864200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:85852600-85853800 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:85852600-85860000 Weak transcription Gastric stomach
17 chr1:85852800-85854200 Weak transcription Pancreas Pancrea
18 chr1:85852800-85858800 Weak transcription HSMM muscle
19 chr1:85852800-85859800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:85853200-85853800 ZNF genes & repeats NHDF-Ad bronchial
21 chr1:85853200-85861800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:85853400-85853800 Weak transcription Fetal Lung lung
23 chr1:85853400-85854000 Strong transcription Osteobl bone
24 chr1:85853400-85854400 Weak transcription HepG2 liver
25 chr1:85853600-85853800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:85853600-85854000 Weak transcription Liver Liver
27 chr1:85853600-85854000 Enhancers Skeletal Muscle Female skeletal muscle
28 chr1:85853600-85854200 Enhancers HUVEC blood vessel
29 chr1:85853600-85861800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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