Variant report

Variant rs2287232
Chromosome Location chr2:51258416-51258417
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:51246400-51258600 Weak transcription H9 Cell Line embryonic stem cell
2 chr2:51249400-51260400 Active TSS Brain Angular Gyrus brain
3 chr2:51252600-51258800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr2:51255400-51258800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr2:51256000-51260200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
6 chr2:51256200-51260200 Active TSS Fetal Brain Female brain
7 chr2:51256400-51259800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
8 chr2:51257000-51260000 Bivalent/Poised TSS Brain Substantia Nigra brain
9 chr2:51257000-51260400 Active TSS Brain Anterior Caudate brain
10 chr2:51257000-51260400 Active TSS Brain Inferior Temporal Lobe brain
11 chr2:51257400-51258600 Active TSS Fetal Muscle Leg muscle
12 chr2:51257400-51259800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
13 chr2:51257600-51258600 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
14 chr2:51257600-51259000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
15 chr2:51257800-51258600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr2:51257800-51258600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
17 chr2:51257800-51258600 Active TSS Fetal Stomach stomach
18 chr2:51257800-51259000 Active TSS Brain Hippocampus Middle brain
19 chr2:51257800-51259800 Active TSS Cortex derived primary cultured neurospheres brain
20 chr2:51257800-51260600 Active TSS H1 Cell Line embryonic stem cell
21 chr2:51258000-51258600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr2:51258000-51258600 Active TSS iPS-18 Cell Line embryonic stem cell
23 chr2:51258000-51259200 Bivalent/Poised TSS Brain Germinal Matrix brain
24 chr2:51258000-51259200 Weak transcription Osteobl bone
25 chr2:51258000-51259800 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
26 chr2:51258000-51260400 Active TSS Fetal Brain Male brain
27 chr2:51258200-51259000 Active TSS Fetal Muscle Trunk muscle
28 chr2:51258200-51259600 Active TSS HUES6 Cell Line embryonic stem cell
29 chr2:51258200-51260600 Active TSS HUES64 Cell Line embryonic stem cell
30 chr2:51258400-51259000 Active TSS Rectal Mucosa Donor 29 rectum
31 chr2:51258400-51259200 Active TSS Right Atrium heart
32 chr2:51258400-51260200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr2:51258400-51260600 Active TSS HUES48 Cell Line embryonic stem cell
34 chr2:51258400-51260600 Active TSS Pancreatic Islets Pancreatic Islet

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