Variant report

Variant rs3806576
Chromosome Location chr2:51257392-51257393
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:51246400-51258600 Weak transcription H9 Cell Line embryonic stem cell
2 chr2:51249400-51260400 Active TSS Brain Angular Gyrus brain
3 chr2:51252600-51258800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr2:51253600-51257400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr2:51253600-51257400 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr2:51253800-51257400 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr2:51253800-51257400 Weak transcription Right Atrium heart
8 chr2:51254000-51257600 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr2:51255200-51257400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr2:51255200-51257800 Weak transcription Fetal Stomach stomach
11 chr2:51255400-51258800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr2:51256000-51257800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr2:51256000-51260200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
14 chr2:51256200-51257400 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr2:51256200-51257400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr2:51256200-51257400 Weak transcription Fetal Muscle Leg muscle
17 chr2:51256200-51260200 Active TSS Fetal Brain Female brain
18 chr2:51256400-51258000 Active TSS Brain Germinal Matrix brain
19 chr2:51256400-51259800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
20 chr2:51256800-51258000 Flanking Active TSS Fetal Brain Male brain
21 chr2:51257000-51257400 Enhancers H1 Cell Line embryonic stem cell
22 chr2:51257000-51257400 Active TSS Brain Cingulate Gyrus brain
23 chr2:51257000-51257800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
24 chr2:51257000-51258000 Active TSS Duodenum Smooth Muscle Duodenum
25 chr2:51257000-51258000 Active TSS Pancreatic Islets Pancreatic Islet
26 chr2:51257000-51260000 Bivalent/Poised TSS Brain Substantia Nigra brain
27 chr2:51257000-51260400 Active TSS Brain Anterior Caudate brain
28 chr2:51257000-51260400 Active TSS Brain Inferior Temporal Lobe brain
29 chr2:51257200-51257600 Active TSS iPS-20b Cell Line embryonic stem cell

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