Variant report

Variant	rs2287376
Chromosome Location	chr14:77686240-77686241
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs2540901	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431017	chr14:76938089-77854647	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	107 gene(s)	inside rSNPs	diseases
2	nsv832834	chr14:77554987-77724357	Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
3	esv3374587	chr14:77686224-77689072	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77654200-77709400	Weak transcription	Esophagus	oesophagus
2	chr14:77674800-77686400	Weak transcription	Brain Substantia Nigra	brain
3	chr14:77680000-77686600	Weak transcription	Brain Angular Gyrus	brain
4	chr14:77680200-77688000	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr14:77683200-77686400	Weak transcription	Fetal Brain Male	brain
6	chr14:77685000-77687400	Enhancers	H1 Cell Line	embryonic stem cell
7	chr14:77685000-77692800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr14:77685200-77690800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr14:77685400-77686600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr14:77685400-77687000	Strong transcription	Pancreatic Islets	Pancreatic Islet
11	chr14:77685400-77692600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr14:77685600-77686600	Enhancers	Liver	Liver
13	chr14:77685600-77687000	Enhancers	Pancreas	Pancrea
14	chr14:77685600-77688000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
15	chr14:77685800-77686400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr14:77685800-77686600	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr14:77685800-77686600	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr14:77686000-77686600	Enhancers	Spleen	Spleen
19	chr14:77686000-77687000	Enhancers	H9 Cell Line	embryonic stem cell
20	chr14:77686000-77687000	Enhancers	Brain Anterior Caudate	brain
21	chr14:77686000-77688200	Weak transcription	Fetal Brain Female	brain
22	chr14:77686200-77686400	Enhancers	Brain Cingulate Gyrus	brain
23	chr14:77686200-77686400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
24	chr14:77686200-77686400	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
25	chr14:77686200-77687000	Enhancers	Brain Inferior Temporal Lobe	brain
26	chr14:77686200-77687000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
27	chr14:77686200-77687200	Enhancers	HUES6 Cell Line	embryonic stem cell

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