The 2.0 version of rSNPBase

Variant report

Variant rs2287425
Chromosome Location chr2:211326134-211326135
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:211293800-211335400 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr2:211294800-211333200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:211295000-211330400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:211295000-211336000 Weak transcription Colonic Mucosa Colon
5 chr2:211295000-211340600 Weak transcription HUVEC blood vessel
6 chr2:211296000-211340200 Weak transcription Small Intestine intestine
7 chr2:211296400-211341000 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr2:211297800-211336200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr2:211299800-211330000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr2:211300400-211329800 Weak transcription A549 lung
11 chr2:211301200-211330000 Weak transcription Gastric stomach
12 chr2:211301200-211340200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr2:211301200-211340600 Weak transcription Fetal Intestine Small intestine
14 chr2:211301200-211340800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr2:211301400-211330000 Weak transcription Muscle Satellite Cultured Cells --
16 chr2:211301400-211330800 Weak transcription Right Ventricle heart
17 chr2:211301400-211334400 Weak transcription NHEK skin
18 chr2:211301400-211336000 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr2:211305600-211326600 Weak transcription Brain Germinal Matrix brain
20 chr2:211306000-211330000 Weak transcription Rectal Smooth Muscle rectum
21 chr2:211306200-211326800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr2:211308000-211332400 Weak transcription Primary monocytes fromperipheralblood blood
23 chr2:211314200-211328800 Strong transcription Primary T cells from cord blood blood
24 chr2:211314400-211327000 Strong transcription Primary T cells fromperipheralblood blood
25 chr2:211315400-211327200 Strong transcription Primary hematopoietic stem cells blood
26 chr2:211315400-211340000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:211315600-211337800 Strong transcription Fetal Thymus thymus
28 chr2:211315600-211339600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr2:211315800-211337200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr2:211315800-211337800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr2:211316000-211338000 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr2:211316200-211326800 Strong transcription Duodenum Mucosa Duodenum
33 chr2:211316200-211337800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr2:211316200-211337800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr2:211316400-211327200 Strong transcription Fetal Intestine Large intestine
36 chr2:211316600-211339000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr2:211316800-211327200 Strong transcription Fetal Lung lung
38 chr2:211316800-211338800 Strong transcription Dnd41 blood
39 chr2:211317000-211326200 Strong transcription Rectal Mucosa Donor 29 rectum
40 chr2:211318000-211337800 Strong transcription Stomach Smooth Muscle stomach
41 chr2:211319600-211330000 Weak transcription NH-A brain
42 chr2:211320000-211330200 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr2:211320000-211331000 Weak transcription Placenta Amnion Placenta Amnion
44 chr2:211320000-211331200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr2:211320000-211333200 Weak transcription NHLF lung
46 chr2:211320400-211329800 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr2:211321000-211329400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr2:211321000-211331400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr2:211321000-211334200 Strong transcription Primary T helper cells PMA-I stimulated --
50 chr2:211321200-211337600 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015