The 2.0 version of rSNPBase

Variant report

Variant rs2289885
Chromosome Location chr8:120592202-120592203
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:120565000-120595200 Weak transcription Fetal Stomach stomach
2 chr8:120566000-120596800 Weak transcription Spleen Spleen
3 chr8:120566000-120609200 Weak transcription Aorta Aorta
4 chr8:120568000-120595400 Weak transcription Fetal Thymus thymus
5 chr8:120568200-120598000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr8:120568600-120594000 Weak transcription Primary T cells from cord blood blood
7 chr8:120569600-120613600 Weak transcription Small Intestine intestine
8 chr8:120571400-120592400 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr8:120572200-120614200 Weak transcription Fetal Intestine Large intestine
10 chr8:120573000-120607200 Weak transcription Stomach Smooth Muscle stomach
11 chr8:120576000-120593600 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr8:120578800-120595200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr8:120579400-120597000 Weak transcription Fetal Intestine Small intestine
14 chr8:120580000-120595000 Weak transcription Brain Anterior Caudate brain
15 chr8:120585000-120595000 Weak transcription Brain Cingulate Gyrus brain
16 chr8:120587000-120594200 Weak transcription Ovary ovary
17 chr8:120587000-120594600 Weak transcription Placenta Placenta
18 chr8:120587000-120598400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr8:120587600-120595600 Weak transcription Brain Angular Gyrus brain
20 chr8:120589000-120595600 Strong transcription Duodenum Mucosa Duodenum
21 chr8:120589000-120598000 Strong transcription Fetal Lung lung
22 chr8:120589200-120595000 Strong transcription Adipose Nuclei Adipose
23 chr8:120589600-120603000 Genic enhancers NHDF-Ad bronchial
24 chr8:120590600-120594200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr8:120590800-120594200 Weak transcription Thymus Thymus
26 chr8:120590800-120596200 Enhancers Muscle Satellite Cultured Cells --
27 chr8:120591000-120593200 Enhancers HSMM muscle
28 chr8:120591000-120593600 Enhancers NH-A brain
29 chr8:120591000-120594000 Enhancers HMEC breast
30 chr8:120591000-120594200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr8:120591000-120605400 Weak transcription Fetal Brain Male brain
32 chr8:120591200-120592800 Enhancers NHEK skin
33 chr8:120591200-120594400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr8:120591400-120592800 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr8:120591400-120592800 Enhancers HSMMtube muscle
36 chr8:120591400-120593000 Enhancers Hela-S3 cervix
37 chr8:120591400-120593200 Enhancers Monocytes-CD14+_RO01746 blood
38 chr8:120591600-120592600 Enhancers Brain Substantia Nigra brain
39 chr8:120591600-120593000 Enhancers A549 lung
40 chr8:120591600-120593600 Weak transcription Brain Inferior Temporal Lobe brain
41 chr8:120591600-120600000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr8:120591800-120592800 Enhancers NHLF lung
43 chr8:120591800-120593600 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr8:120591800-120593800 Weak transcription Liver Liver
45 chr8:120591800-120594000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr8:120591800-120594200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr8:120591800-120594600 Enhancers Osteobl bone
48 chr8:120591800-120594800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr8:120591800-120594800 Weak transcription Psoas Muscle Psoas
50 chr8:120591800-120595200 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015