Variant report

Variant rs2292557
Chromosome Location chr1:226040526-226040527
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:226013600-226052600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:226014800-226047800 Weak transcription Psoas Muscle Psoas
3 chr1:226016000-226051000 Weak transcription NH-A brain
4 chr1:226017400-226049800 Weak transcription HUVEC blood vessel
5 chr1:226020600-226042000 Weak transcription Hela-S3 cervix
6 chr1:226020600-226042400 Weak transcription HSMM muscle
7 chr1:226026800-226061600 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:226029800-226050600 Strong transcription Right Ventricle heart
9 chr1:226030400-226046800 Strong transcription Primary neutrophils fromperipheralblood blood
10 chr1:226030400-226052600 Weak transcription HSMMtube muscle
11 chr1:226033600-226041600 Genic enhancers Primary T cells fromperipheralblood blood
12 chr1:226033600-226053000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:226033800-226041000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr1:226033800-226067400 Strong transcription H9 Cell Line embryonic stem cell
15 chr1:226034000-226056800 Strong transcription Adipose Nuclei Adipose
16 chr1:226034000-226063000 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr1:226034200-226040800 Strong transcription iPS-20b Cell Line embryonic stem cell
18 chr1:226034200-226062800 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr1:226034600-226047600 Weak transcription NHEK skin
20 chr1:226034800-226040600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:226036000-226049000 Weak transcription A549 lung
22 chr1:226036400-226043200 Strong transcription Fetal Intestine Large intestine
23 chr1:226036600-226041800 Weak transcription Muscle Satellite Cultured Cells --
24 chr1:226036600-226042600 Strong transcription Colonic Mucosa Colon
25 chr1:226036600-226064600 Weak transcription Fetal Heart heart
26 chr1:226036800-226044800 Genic enhancers Fetal Thymus thymus
27 chr1:226036800-226048600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:226036800-226058600 Weak transcription Brain Germinal Matrix brain
29 chr1:226036800-226066600 Weak transcription Fetal Brain Male brain
30 chr1:226037000-226045400 Strong transcription Sigmoid Colon Sigmoid Colon
31 chr1:226037000-226054200 Weak transcription Small Intestine intestine
32 chr1:226037400-226041400 Genic enhancers Primary B cells from peripheral blood blood
33 chr1:226037400-226048600 Weak transcription Dnd41 blood
34 chr1:226037400-226051800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:226037600-226040800 Genic enhancers Primary T killer memory cells from peripheral blood blood
36 chr1:226037600-226043400 Strong transcription Duodenum Mucosa Duodenum
37 chr1:226037600-226051800 Strong transcription Rectal Mucosa Donor 29 rectum
38 chr1:226037600-226060600 Strong transcription Placenta Placenta
39 chr1:226037800-226042800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr1:226037800-226043200 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:226037800-226045000 Strong transcription Gastric stomach
42 chr1:226037800-226046200 Strong transcription Rectal Mucosa Donor 31 rectum
43 chr1:226037800-226048400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:226037800-226065200 Weak transcription Right Atrium heart
45 chr1:226038000-226052400 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr1:226038200-226041400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:226038200-226042800 Strong transcription Spleen Spleen
48 chr1:226038200-226043000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
49 chr1:226038200-226043200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:226038200-226043400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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