Variant report

Variant rs60888123
Chromosome Location chr1:225980328-225980329
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225969800-225983000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr1:225970200-225983200 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr1:225970600-225980600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:225970600-225981800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr1:225970800-225982200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:225971600-225982800 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr1:225973600-225983400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:225973800-225986000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr1:225974600-225985600 Weak transcription Fetal Heart heart
10 chr1:225975000-225980600 Weak transcription Psoas Muscle Psoas
11 chr1:225975000-225997200 Weak transcription Brain Substantia Nigra brain
12 chr1:225975000-225997400 Weak transcription Aorta Aorta
13 chr1:225975200-225981200 Weak transcription Fetal Brain Male brain
14 chr1:225975400-225981800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr1:225975400-225983800 Weak transcription Pancreas Pancrea
16 chr1:225975600-225981600 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:225975600-225983400 Weak transcription NHLF lung
18 chr1:225976000-225984000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr1:225976200-225984400 Weak transcription HepG2 liver
20 chr1:225976200-225989000 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:225976400-225982400 Weak transcription Brain Hippocampus Middle brain
22 chr1:225976800-225981000 Weak transcription Small Intestine intestine
23 chr1:225978200-225982200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:225978200-225983000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:225978400-225980400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:225978400-225981200 Strong transcription Adipose Nuclei Adipose
27 chr1:225978400-225982600 Strong transcription Primary T cells from cord blood blood
28 chr1:225978400-225983200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:225978400-225983400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
30 chr1:225978400-225984400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:225978600-225988200 Weak transcription NHDF-Ad bronchial
32 chr1:225978800-225981000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr1:225978800-225981400 Weak transcription Hela-S3 cervix
34 chr1:225978800-225984800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr1:225978800-225985600 Weak transcription HMEC breast
36 chr1:225978800-225989800 Weak transcription HSMMtube muscle
37 chr1:225978800-225997200 Weak transcription K562 blood
38 chr1:225979000-225981400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:225979000-225985800 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr1:225979000-225986800 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr1:225979000-225987400 Weak transcription Brain Cingulate Gyrus brain
42 chr1:225979000-225993200 Weak transcription HUVEC blood vessel
43 chr1:225979200-225981000 Weak transcription Colonic Mucosa Colon
44 chr1:225979200-225981200 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr1:225979200-225981800 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:225979200-225984200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr1:225979200-225997200 Weak transcription Right Ventricle heart
48 chr1:225979400-225981600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr1:225979600-225981200 Strong transcription Dnd41 blood
50 chr1:225979600-225981600 Weak transcription H9 Cell Line embryonic stem cell

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