Variant report

Variant	rs229608
Chromosome Location	chr14:65300451-65300452
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs151167	0.93[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs179337	0.83[AMR][1000 genomes]
rs229610	1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs420363	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs420614	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6573574	0.90[LWK][hapmap];1.00[MKK][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3693408	chr14:65292670-65358576	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65296400-65308600	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr14:65297200-65301200	Enhancers	Psoas Muscle	Psoas
3	chr14:65297200-65304000	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr14:65298000-65306800	Weak transcription	Right Atrium	heart
5	chr14:65298400-65309800	Weak transcription	Right Ventricle	heart
6	chr14:65300000-65304800	Weak transcription	K562	blood
7	chr14:65300200-65300600	Weak transcription	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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