Variant report

Variant	rs6573574
Chromosome Location	chr14:65284039-65284040
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1271041	0.93[YRI][hapmap];0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs151167	0.90[LWK][hapmap];1.00[MKK][hapmap]
rs17102130	0.85[ASW][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs229608	0.90[LWK][hapmap];1.00[MKK][hapmap]
rs371350	0.83[YRI][hapmap]
rs389986	0.93[YRI][hapmap];0.83[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs57329695	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7147977	1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7149479	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7151337	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs8004397	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs8016674	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs8016839	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs8017192	1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs8022259	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65262000-65289800	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr14:65268400-65290200	Weak transcription	Brain Germinal Matrix	brain
3	chr14:65271400-65289800	Weak transcription	Brain Anterior Caudate	brain
4	chr14:65273800-65287200	Weak transcription	K562	blood
5	chr14:65274600-65284600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr14:65275800-65290000	Weak transcription	Psoas Muscle	Psoas
7	chr14:65279400-65284200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr14:65279400-65284400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr14:65279400-65284400	Weak transcription	Aorta	Aorta
10	chr14:65279400-65284600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr14:65279400-65287000	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr14:65281800-65288400	Genic enhancers	Skeletal Muscle Female	skeletal muscle
13	chr14:65282800-65284200	Strong transcription	Fetal Muscle Leg	muscle
14	chr14:65283400-65285000	Strong transcription	Skeletal Muscle Male	skeletal muscle
15	chr14:65283600-65289400	Weak transcription	Right Ventricle	heart
16	chr14:65283600-65289600	Weak transcription	Fetal Heart	heart
17	chr14:65284000-65284400	Weak transcription	Left Ventricle	heart
18	chr14:65284000-65285200	Enhancers	HSMMtube	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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