Variant report

Variant	rs2296914
Chromosome Location	chr13:51580873-51580874
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs17075139	1.00[CHB][hapmap];0.87[CHD][hapmap];0.85[JPT][hapmap];0.85[MEX][hapmap];0.83[TSI][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1870839	1.00[LWK][hapmap]
rs2281993	0.82[CHB][hapmap];0.91[CHD][hapmap];0.92[JPT][hapmap];0.85[MEX][hapmap];0.97[ASN][1000 genomes]
rs3790031	0.92[EUR][1000 genomes]
rs58094875	0.89[ASN][1000 genomes]
rs60194361	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7317089	0.84[CHB][hapmap];0.96[CHD][hapmap];0.87[ASN][1000 genomes]
rs7333942	0.87[ASN][1000 genomes]
rs7339210	0.83[CHB][hapmap];0.87[ASN][1000 genomes]
rs74080382	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74080386	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74080387	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74080392	0.91[ASN][1000 genomes]
rs74080393	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74080395	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:51577800-51581000	Enhancers	Fetal Muscle Leg	muscle
2	chr13:51578200-51581800	Enhancers	Fetal Intestine Large	intestine
3	chr13:51578800-51581800	Enhancers	Fetal Intestine Small	intestine
4	chr13:51579200-51581200	Enhancers	HSMMtube	muscle
5	chr13:51579400-51581600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr13:51579400-51583800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr13:51579600-51581000	Enhancers	Duodenum Mucosa	Duodenum
8	chr13:51579600-51581400	Enhancers	Muscle Satellite Cultured Cells	--
9	chr13:51579800-51581200	Enhancers	Aorta	Aorta
10	chr13:51580400-51581200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr13:51580400-51581400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr13:51580400-51581400	Enhancers	NHDF-Ad	bronchial
13	chr13:51580600-51581000	Enhancers	Fetal Stomach	stomach
14	chr13:51580600-51581400	Enhancers	HepG2	liver
15	chr13:51580800-51581000	Enhancers	Fetal Muscle Trunk	muscle
16	chr13:51580800-51581400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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