The 2.0 version of rSNPBase

Variant report

Variant rs2297369
Chromosome Location chr6:160524671-160524672
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:160453000-160534600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr6:160455800-160532000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr6:160464600-160531800 Strong transcription Fetal Adrenal Gland Adrenal Gland
4 chr6:160465600-160530800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr6:160477200-160531200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr6:160477200-160531400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:160487600-160530800 Strong transcription Breast Myoepithelial Primary Cells Breast
8 chr6:160490200-160531400 Strong transcription Dnd41 blood
9 chr6:160491200-160531400 Strong transcription Fetal Thymus thymus
10 chr6:160492000-160528800 Strong transcription Primary T cells fromperipheralblood blood
11 chr6:160501600-160527000 Strong transcription HUES48 Cell Line embryonic stem cell
12 chr6:160504800-160529400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr6:160510200-160526800 Strong transcription HSMMtube muscle
14 chr6:160510200-160531000 Strong transcription Muscle Satellite Cultured Cells --
15 chr6:160511000-160531600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr6:160511000-160531600 Strong transcription Fetal Muscle Leg muscle
17 chr6:160511400-160526400 Weak transcription Hela-S3 cervix
18 chr6:160511400-160532600 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr6:160512000-160532800 Weak transcription A549 lung
20 chr6:160512000-160539200 Weak transcription Stomach Mucosa stomach
21 chr6:160512600-160529200 Strong transcription Rectal Mucosa Donor 29 rectum
22 chr6:160512800-160527800 Strong transcription Rectal Mucosa Donor 31 rectum
23 chr6:160515400-160525000 Weak transcription Fetal Kidney kidney
24 chr6:160515600-160527800 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr6:160518000-160525400 Weak transcription Aorta Aorta
26 chr6:160518000-160526600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr6:160518000-160532200 Weak transcription Fetal Brain Male brain
28 chr6:160518400-160524800 Weak transcription NHDF-Ad bronchial
29 chr6:160519600-160524800 Weak transcription H9 Cell Line embryonic stem cell
30 chr6:160520200-160528600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr6:160520800-160525200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:160521600-160529600 Strong transcription Rectal Smooth Muscle rectum
33 chr6:160521800-160529400 Strong transcription Primary T regulatory cells fromperipheralblood blood
34 chr6:160521800-160537600 Strong transcription Fetal Intestine Small intestine
35 chr6:160522000-160526000 Strong transcription Psoas Muscle Psoas
36 chr6:160522000-160527400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr6:160522000-160528000 Strong transcription Primary B cells from cord blood blood
38 chr6:160522000-160529400 Strong transcription Skeletal Muscle Male skeletal muscle
39 chr6:160522000-160530600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr6:160522000-160531000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr6:160522000-160531400 Strong transcription Fetal Muscle Trunk muscle
42 chr6:160522000-160531600 Strong transcription Thymus Thymus
43 chr6:160522200-160526000 Strong transcription HSMM muscle
44 chr6:160522200-160526800 Strong transcription HUES6 Cell Line embryonic stem cell
45 chr6:160522200-160526800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
46 chr6:160522200-160526800 Strong transcription Brain Angular Gyrus brain
47 chr6:160522200-160526800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr6:160522200-160527200 Strong transcription Stomach Smooth Muscle stomach
49 chr6:160522200-160527400 Strong transcription Brain Cingulate Gyrus brain
50 chr6:160522200-160527600 Strong transcription Primary T helper cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015