The 2.0 version of rSNPBase

Variant report

Variant rs2297764
Chromosome Location chr1:165622211-165622212
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165602000-165622800 Weak transcription Primary hematopoietic stem cells blood
2 chr1:165602200-165624200 Weak transcription Dnd41 blood
3 chr1:165603800-165624200 Weak transcription Brain Germinal Matrix brain
4 chr1:165603800-165631200 Weak transcription Fetal Kidney kidney
5 chr1:165604400-165628000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:165604800-165623000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr1:165604800-165628400 Weak transcription H1 Cell Line embryonic stem cell
8 chr1:165604800-165632200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:165605200-165628800 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr1:165605600-165622600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr1:165606200-165659600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:165606800-165622800 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr1:165607200-165623000 Weak transcription H9 Cell Line embryonic stem cell
14 chr1:165610600-165630800 Weak transcription Small Intestine intestine
15 chr1:165611400-165622400 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:165615200-165628400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:165615400-165622800 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:165615400-165630000 Weak transcription GM12878-XiMat blood
19 chr1:165615600-165629600 Weak transcription Primary B cells from cord blood blood
20 chr1:165615600-165630200 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:165615600-165631000 Weak transcription NHEK skin
22 chr1:165615800-165631000 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr1:165616400-165622800 Weak transcription Spleen Spleen
24 chr1:165616400-165630200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr1:165616400-165632000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr1:165616800-165623000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr1:165617000-165630000 Weak transcription Thymus Thymus
28 chr1:165617000-165631200 Strong transcription Fetal Stomach stomach
29 chr1:165617400-165625800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:165617400-165627800 Strong transcription Fetal Intestine Small intestine
31 chr1:165617600-165622400 Weak transcription Esophagus oesophagus
32 chr1:165617600-165623400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:165617600-165627800 Strong transcription Lung lung
34 chr1:165618000-165626200 Strong transcription Rectal Mucosa Donor 29 rectum
35 chr1:165618000-165627600 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr1:165618000-165631000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:165618000-165638600 Strong transcription Cortex derived primary cultured neurospheres brain
38 chr1:165618200-165625400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:165618200-165652400 Strong transcription Fetal Muscle Leg muscle
40 chr1:165618400-165626400 Strong transcription Fetal Lung lung
41 chr1:165618400-165627200 Strong transcription Primary monocytes fromperipheralblood blood
42 chr1:165618400-165627200 Strong transcription Sigmoid Colon Sigmoid Colon
43 chr1:165618600-165627200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
44 chr1:165618600-165627800 Strong transcription Duodenum Mucosa Duodenum
45 chr1:165618600-165634800 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr1:165618800-165625200 Strong transcription Primary T cells fromperipheralblood blood
47 chr1:165618800-165630800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:165618800-165638600 Strong transcription Fetal Intestine Large intestine
49 chr1:165619000-165623400 Strong transcription Stomach Mucosa stomach
50 chr1:165619000-165624600 Strong transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015